RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 KAT7O95251 611 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 KLF8O95600 359 aaPredicted RBP14.07□□□□□ -0.16
VCL-205ENST00000478896 STAU1O95793 577 aaKnown RBP14.07□□□□□ -0.16
VCL-205ENST00000478896 BCKDHBP21953 392 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 EIF2DP41214 584 aaKnown RBP14.07□□□□□ -0.16
VCL-205ENST00000478896 AFMP43652 599 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 SLC6A11P48066 632 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 CASP4P49662 377 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 NOVA1P51513 510 aaKnown RBP14.07□□□□□ -0.16
VCL-205ENST00000478896 ZNF667Q5HYK9 610 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 EOGTQ5NDL2 527 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 FAM35AQ86V20 835 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 C12orf40Q86WS4 652 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 ABCA7Q8IZY2 2146 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 WHAMMQ8TF30 809 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 OVCA2Q8WZ82 227 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 ZNF516Q92618 1163 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 SMARCD1Q96GM5 515 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 TNIP3Q96KP6 325 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 B3GNT5Q9BYG0 378 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 SMYD3Q9H7B4 428 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 ARHGEF4Q9NR80 690 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 TMEM30AQ9NV96 361 aa14.07□□□□□ -0.16
VCL-205ENST00000478896 CGNQ9P2M7 1197 aaKnown RBP14.07□□□□□ -0.16
VCL-205ENST00000478896 COCHO43405 550 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 ME1P48163 572 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 SLC5A3P53794 718 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 GAD2Q05329 585 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 EHHADHQ08426 723 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 KNOP1Q1ED39 458 aaKnown RBP14.06□□□□□ -0.16
VCL-205ENST00000478896 BMT2Q1RMZ1 405 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 HSF5Q4G112 596 aaPredicted RBP14.06□□□□□ -0.16
VCL-205ENST00000478896 HECTD3Q5T447 861 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 BTBD8Q5XKL5 378 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 TMEM92Q6UXU6 159 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 C12orf56Q8IXR9 622 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 CEP57L1Q8IYX8 460 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 PGBD3Q8N328 593 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 HMGB4Q8WW32 186 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 PIGKQ92643 395 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 KCNK16Q96T55 309 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 XYLT2Q9H1B5 865 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 DMAP1Q9NPF5 467 aaPredicted RBP14.06□□□□□ -0.16
VCL-205ENST00000478896 KRT82Q9NSB4 513 aa14.06□□□□□ -0.16
VCL-205ENST00000478896 WDR87Q6ZQQ6 2873 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 TCRBV21S2A2A0A5A6 115 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 E2F8A0AVK6 867 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 SGK1O00141 431 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 MAP3K13O43283 966 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 HSP90AA1P07900 732 aaKnown RBP14.05□□□□□ -0.16
VCL-205ENST00000478896 IRF1P10914 325 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 P4HA1P13674 534 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 GRIA2P42262 883 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 AP3M2P53677 418 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 CDH8P55286 799 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 CUL4BQ13620 913 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 NCOA4Q13772 614 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 ANO4Q32M45 955 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 PREPLQ4J6C6 727 aaPredicted RBP14.05□□□□□ -0.16
VCL-205ENST00000478896 LY6G5CQ5SRR4 150 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 RHBDF2Q6PJF5 856 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 ARMCX6Q7L4S7 300 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 LPCAT2Q7L5N7 544 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 SFTPA1Q8IWL2 248 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 IL17RCQ8NAC3 791 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 SCAMP5Q8TAC9 235 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 GOLGA5Q8TBA6 731 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 RLN3Q8WXF3 142 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 OTUB2Q96DC9 234 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 VRTNQ9H8Y1 702 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 ZDHHC4Q9NPG8 344 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 TMEM9BQ9NQ34 198 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 GMIPQ9P107 970 aa14.05□□□□□ -0.16
VCL-205ENST00000478896 CHORDC1Q9UHD1 332 aaPredicted RBP14.05□□□□□ -0.16
VCL-205ENST00000478896 TPRP12270 2363 aaKnown RBP14.05□□□□□ -0.16
VCL-205ENST00000478896 PVALEFA0A1B0GWK0 134 aa14.04□□□□□ -0.16
VCL-205ENST00000478896 TBC1D3BA6NDS4 549 aa14.04□□□□□ -0.16
VCL-205ENST00000478896 LRRIQ3A6PVS8 624 aaPredicted RBP14.04□□□□□ -0.16
VCL-205ENST00000478896 PATE3B3GLJ2 98 aa14.04□□□□□ -0.16
VCL-205ENST00000478896 AP1G2O75843 785 aa14.04□□□□□ -0.16
VCL-205ENST00000478896 HNRNPLP14866 589 aaKnown RBP eCLIP14.04□□□□□ -0.16
VCL-205ENST00000478896 TRIM21P19474 475 aaKnown RBP14.04□□□□□ -0.16
VCL-205ENST00000478896 SHC2P98077 582 aa14.04□□□□□ -0.16
VCL-205ENST00000478896 ZNF252P-AS1Q0IIN9 211 aa14.04□□□□□ -0.16
VCL-205ENST00000478896 MESP2Q0VG99 397 aa14.04□□□□□ -0.16
VCL-205ENST00000478896 EMC10Q5UCC4 262 aa14.04□□□□□ -0.16
VCL-205ENST00000478896 NUDT18Q6ZVK8 323 aa14.04□□□□□ -0.16
VCL-205ENST00000478896 NAT16Q8N8M0 369 aa14.04□□□□□ -0.16
VCL-205ENST00000478896 ELMO3Q96BJ8 720 aa14.04□□□□□ -0.16
VCL-205ENST00000478896 GZF1Q9H116 711 aaPredicted RBP14.04□□□□□ -0.16
VCL-205ENST00000478896 CCSER2Q9H7U1 834 aa14.04□□□□□ -0.16
VCL-205ENST00000478896 EXOC1Q9NV70 894 aa14.04□□□□□ -0.16
VCL-205ENST00000478896 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 F13A1P00488 732 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 CCDC130P13994 396 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 P2RY2P41231 377 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 TNFRSF4P43489 277 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 KIR2DL1P43626 348 aaPredicted RBP14.03□□□□□ -0.16
VCL-205ENST00000478896 TUBP50607 506 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 ORC1Q13415 861 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms