RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 USP9YO00507 2555 aaPredicted RBP13.14□□□□□ -0.31
HDAC8-217ENST00000478743 PRRT4C9JH25 899 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 CYB561D2O14569 222 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 PCDHGA12O60330 932 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 CR2P20023 1033 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 ACAT1P24752 427 aaKnown RBP13.14□□□□□ -0.31
HDAC8-217ENST00000478743 SUZ12Q15022 739 aaKnown RBP13.14□□□□□ -0.31
HDAC8-217ENST00000478743 ENOX2Q16206 610 aaKnown RBP13.14□□□□□ -0.31
HDAC8-217ENST00000478743 PRAMEF14Q5SWL7 426 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 RNF20Q5VTR2 975 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 SPATA1Q5VX52 437 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 JADE1Q6IE81 842 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 GALNT17Q6IS24 598 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 TRMT11Q7Z4G4 463 aaKnown RBP13.14□□□□□ -0.31
HDAC8-217ENST00000478743 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 CHPFQ8IZ52 775 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 ZNF248Q8NDW4 579 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 SNX19Q92543 992 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 WBP2Q969T9 261 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 CNDP2Q96KP4 475 aaKnown RBP13.14□□□□□ -0.31
HDAC8-217ENST00000478743 MTMR9Q96QG7 549 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 PKMYT1Q99640 499 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 LARP6Q9BRS8 491 aaKnown RBP13.14□□□□□ -0.31
HDAC8-217ENST00000478743 AGXT2Q9BYV1 514 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 FAM117AQ9C073 453 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 ANKRD6Q9Y2G4 727 aa13.14□□□□□ -0.31
HDAC8-217ENST00000478743 E2F8A0AVK6 867 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 ANO9A1A5B4 782 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.13□□□□□ -0.31
HDAC8-217ENST00000478743 PIRO00625 290 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 SLC16A4O15374 487 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 FAM189A1O60320 539 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 ADH1CP00326 375 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 GRIK1P39086 918 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 CCR10P46092 362 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 PCBP4P57723 403 aaKnown RBP13.13□□□□□ -0.31
HDAC8-217ENST00000478743 PPP2R3AQ06190 1150 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 MCL1Q07820 350 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 VAC14Q08AM6 782 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 MAPK7Q13164 816 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 UBAP2LQ14157 1087 aaKnown RBP13.13□□□□□ -0.31
HDAC8-217ENST00000478743 FUT11Q495W5 492 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 C4orf17Q53FE4 359 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 SNRNP27Q8WVK2 155 aaKnown RBP13.13□□□□□ -0.31
HDAC8-217ENST00000478743 KIFAP3Q92845 792 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 TNFRSF25Q93038 417 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 MKRN2Q9H000 416 aaKnown RBP13.13□□□□□ -0.31
HDAC8-217ENST00000478743 BHMT2Q9H2M3 363 aa13.13□□□□□ -0.31
HDAC8-217ENST00000478743 MYH11P35749 1972 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 CKAP5Q14008 2032 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 ABCA12Q86UK0 2595 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 KLK10O43240 276 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 TOM1L1O75674 476 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 OLFM2O95897 454 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 TPMTP51580 245 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 SLC7A9P82251 487 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 SHBQ15464 509 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 BROXQ5VW32 411 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 SCARA3Q6AZY7 606 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 DCP1BQ8IZD4 617 aaKnown RBP13.12□□□□□ -0.31
HDAC8-217ENST00000478743 CADM4Q8NFZ8 388 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 IGSF8Q969P0 613 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 JAKMIP1Q96N16 626 aaKnown RBP13.12□□□□□ -0.31
HDAC8-217ENST00000478743 NAP1L4Q99733 375 aaKnown RBP13.12□□□□□ -0.31
HDAC8-217ENST00000478743 C6orf106Q9H6K1 298 aaPredicted RBP13.12□□□□□ -0.31
HDAC8-217ENST00000478743 PLEKHA5Q9HAU0 1116 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 TM9SF3Q9HD45 589 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 FBN2P35556 2912 aa13.12□□□□□ -0.31
HDAC8-217ENST00000478743 MYH10P35580 1976 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 HOXC11O43248 304 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-217ENST00000478743 NEMFO60524 1076 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 HIP1RO75146 1068 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 CLTAP09496 248 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 GLDCP23378 1020 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 CTSKP43235 329 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 UCNP55089 124 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 INSM1Q01101 510 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-217ENST00000478743 SMARCB1Q12824 385 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 PDIA5Q14554 519 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 KDM7AQ6ZMT4 941 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 FAM124AQ86V42 546 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 OSTM1Q86WC4 334 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 TMEM25Q86YD3 366 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 SCN4BQ8IWT1 228 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 DHX40Q8IX18 779 aaKnown RBP13.11□□□□□ -0.31
HDAC8-217ENST00000478743 THEM5Q8N1Q8 247 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 KCNV2Q8TDN2 545 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 LEO1Q8WVC0 666 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-217ENST00000478743 KMT5AQ9NQR1 393 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 ITM2CQ9NQX7 267 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 DEC1Q9P2X7 70 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 STARD13Q9Y3M8 1113 aa13.11□□□□□ -0.31
HDAC8-217ENST00000478743 COL27A1Q8IZC6 1860 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-217ENST00000478743 SFI1A8K8P3 1242 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 PAPSS1O43252 624 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-217ENST00000478743 SUV39H1O43463 412 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 LDOC1O95751 146 aaPredicted RBP13.1□□□□□ -0.31
HDAC8-217ENST00000478743 MPOP05164 745 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 AFF3P51826 1226 aaKnown RBP13.1□□□□□ -0.31
HDAC8-217ENST00000478743 RPL10AP62906 217 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms