RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 CCDC65Q8IXS2 484 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 PDZD8Q8NEN9 1154 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 CEP76Q8TAP6 659 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 HMGB4Q8WW32 186 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 OVCA2Q8WZ82 227 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 DUSP9Q99956 384 aaKnown RBP10.28□□□□□ -0.76
CCM2-210ENST00000478169 FGFBP2Q9BYJ0 223 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 ELOVL4Q9GZR5 314 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 SNX25Q9H3E2 840 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 ARHGEF4Q9NR80 690 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 TMEM74BQ9NUR3 256 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 SMPD4Q9NXE4 827 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 CFAP97Q9P2B7 532 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 MBD1Q9UIS9 605 aaPredicted RBP10.28□□□□□ -0.76
CCM2-210ENST00000478169 PILRBQ9UKJ0 227 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 PCDH15Q96QU1 1955 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 PTPRJQ12913 1337 aa10.28□□□□□ -0.76
CCM2-210ENST00000478169 FASNP49327 2511 aaKnown RBP10.28□□□□□ -0.76
CCM2-210ENST00000478169 DMXL2Q8TDJ6 3036 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 TCRBV21S2A2A0A5A6 115 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 SRRM3A6NNA2 597 aaPredicted RBP10.27□□□□□ -0.77
CCM2-210ENST00000478169 ADAM23O75077 832 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 RTN3O95197 1032 aaPredicted RBP10.27□□□□□ -0.77
CCM2-210ENST00000478169 PTPN1P18031 435 aaKnown RBP10.27□□□□□ -0.77
CCM2-210ENST00000478169 RDXP35241 583 aaKnown RBP10.27□□□□□ -0.77
CCM2-210ENST00000478169 STAT6P42226 847 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 MAPK8P45983 427 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 MESP2Q0VG99 397 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 SEMA3BQ13214 749 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 DUOXA1Q1HG43 343 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 LY6G5CQ5SRR4 150 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 SLC36A4Q6YBV0 504 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 NUDT18Q6ZVK8 323 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 ARMCX6Q7L4S7 300 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 CBWD2Q8IUF1 395 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 SFTPA1Q8IWL2 248 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 PGBD3Q8N328 593 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 PHTF2Q8N3S3 785 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 FRMD1Q8N878 549 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 OR6B3Q8NGW1 331 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 CLIC6Q96NY7 704 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 MRPL45Q9BRJ2 306 aaKnown RBP10.27□□□□□ -0.77
CCM2-210ENST00000478169 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
CCM2-210ENST00000478169 HSPBP1Q9NZL4 362 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.77
CCM2-210ENST00000478169 SLC6A14Q9UN76 642 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 MSRB2Q9Y3D2 182 aa10.27□□□□□ -0.77
CCM2-210ENST00000478169 MORC2Q9Y6X9 1032 aaPredicted RBP10.27□□□□□ -0.77
CCM2-210ENST00000478169 ANKRD11Q6UB99 2663 aaPredicted RBP10.27□□□□□ -0.77
CCM2-210ENST00000478169 DSPP15924 2871 aaKnown RBP10.27□□□□□ -0.77
CCM2-210ENST00000478169 ASPMQ8IZT6 3477 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 VPS37CA5D8V6 355 aaPredicted RBP10.26□□□□□ -0.77
CCM2-210ENST00000478169 FAM221BA6H8Z2 402 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 TBC1D3BA6NDS4 549 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 H0Y626 953 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 HOXC11O43248 304 aaPredicted RBP10.26□□□□□ -0.77
CCM2-210ENST00000478169 TRIM16O95361 564 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 STAU1O95793 577 aaKnown RBP10.26□□□□□ -0.77
CCM2-210ENST00000478169 CST3P01034 146 aaPredicted RBP10.26□□□□□ -0.77
CCM2-210ENST00000478169 SERPINF2P08697 491 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 PDCP20941 246 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 ITPKAP23677 461 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 YWHAQP27348 245 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 TUBP50607 506 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 ATXN3P54252 364 aaPredicted RBP10.26□□□□□ -0.77
CCM2-210ENST00000478169 TNNC1P63316 161 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 KDSRQ06136 332 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 GFPT1Q06210 699 aaPredicted RBP10.26□□□□□ -0.77
CCM2-210ENST00000478169 HNRNPDQ14103 355 aaKnown RBP10.26□□□□□ -0.77
CCM2-210ENST00000478169 WDR72Q3MJ13 1102 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 SNX30Q5VWJ9 437 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 BTBD8Q5XKL5 378 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 ETFBKMTQ8IXQ9 262 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 NUP93Q8N1F7 819 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 HDDC3Q8N4P3 179 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 ZNF513Q8N8E2 541 aaPredicted RBP10.26□□□□□ -0.77
CCM2-210ENST00000478169 ZCCHC14Q8WYQ9 949 aaKnown RBP10.26□□□□□ -0.77
CCM2-210ENST00000478169 LRRC27Q9C0I9 530 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 CAPN10Q9HC96 672 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 TMEM30AQ9NV96 361 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 DEC1Q9P2X7 70 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 SH3BP1Q9Y3L3 701 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 STARD13Q9Y3M8 1113 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 NME7Q9Y5B8 376 aa10.26□□□□□ -0.77
CCM2-210ENST00000478169 SPEGQ15772 3267 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 A8MXQ7 604 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 SCAMP3O14828 347 aaKnown RBP10.25□□□□□ -0.77
CCM2-210ENST00000478169 EIF3DO15371 548 aaKnown RBP eCLIP10.25□□□□□ -0.77
CCM2-210ENST00000478169 ZBTB24O43167 697 aaPredicted RBP10.25□□□□□ -0.77
CCM2-210ENST00000478169 COCHO43405 550 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 HYAL3O43820 417 aaPredicted RBP10.25□□□□□ -0.77
CCM2-210ENST00000478169 OPHN1O60890 802 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 TULP3O75386 442 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 CFIP05156 583 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 DLATP10515 647 aaKnown RBP10.25□□□□□ -0.77
CCM2-210ENST00000478169 GABRG2P18507 467 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 TNNI1P19237 187 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 CACNA2D1P54289 1103 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 SNRPFP62306 86 aaKnown RBP10.25□□□□□ -0.77
CCM2-210ENST00000478169 SIM1P81133 766 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms