RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 SFRP4Q6FHJ7 346 aaPredicted RBP5.4□□□□□ -1.54
LMBR1-216ENST00000477983 CLEC17AQ6ZS10 378 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 MTERF4Q7Z6M4 381 aaKnown RBP5.4□□□□□ -1.54
LMBR1-216ENST00000477983 PPP1R3BQ86XI6 285 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 KLHDC4Q8TBB5 520 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 FAM167AQ96KS9 214 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 MAP7D2Q96T17 732 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 DDX19BQ9UMR2 479 aa5.4□□□□□ -1.54
LMBR1-216ENST00000477983 PIK3R4Q99570 1358 aa5.4□□□□□ -1.55
LMBR1-216ENST00000477983 XRN1Q8IZH2 1706 aaKnown RBP5.4□□□□□ -1.55
LMBR1-216ENST00000477983 PTCH1Q13635 1447 aa5.4□□□□□ -1.55
LMBR1-216ENST00000477983 KIF20BQ96Q89 1820 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 ADGRB2O60241 1585 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 CDC42BPGQ6DT37 1551 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 M0QYG6 137 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 PPM1DO15297 605 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 TP73O15350 636 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 IGHDP01880 384 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 AHSGP02765 367 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 HSP90AA1P07900 732 aaKnown RBP5.39□□□□□ -1.55
LMBR1-216ENST00000477983 KELP23276 732 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 CERS1P27544 350 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 ALDH9A1P49189 494 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 MVPQ14764 893 aaKnown RBP5.39□□□□□ -1.55
LMBR1-216ENST00000477983 PGS1Q32NB8 556 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 AARS2Q5JTZ9 985 aaKnown RBP5.39□□□□□ -1.55
LMBR1-216ENST00000477983 ZNF626Q68DY1 528 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 ZNF66Q6ZN08 573 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 BHLHA9Q7RTU4 235 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 WDR53Q7Z5U6 358 aaPredicted RBP5.39□□□□□ -1.55
LMBR1-216ENST00000477983 CATIPQ7Z7H3 387 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 NEK8Q86SG6 692 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 ZBTB46Q86UZ6 589 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 HSCBQ8IWL3 235 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 ZNF366Q8N895 744 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 CHMP4CQ96CF2 233 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 TRIM44Q96DX7 344 aaPredicted RBP5.39□□□□□ -1.55
LMBR1-216ENST00000477983 HSPBAP1Q96EW2 488 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 GTPBP4Q9BZE4 634 aaKnown RBP5.39□□□□□ -1.55
LMBR1-216ENST00000477983 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.39□□□□□ -1.55
LMBR1-216ENST00000477983 LUC7L2Q9Y383 392 aaKnown RBP5.39□□□□□ -1.55
LMBR1-216ENST00000477983 ACEP12821 1306 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 ITSN1Q15811 1721 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 ANKRD26Q9UPS8 1709 aa5.39□□□□□ -1.55
LMBR1-216ENST00000477983 CPSF1Q10570 1443 aaKnown RBP5.39□□□□□ -1.55
LMBR1-216ENST00000477983 EDC4Q6P2E9 1401 aaKnown RBP5.39□□□□□ -1.55
LMBR1-216ENST00000477983 AKAP12Q02952 1782 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 MYO1FO00160 1098 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 U2AF1L5P0DN76 240 aaPredicted RBP5.38□□□□□ -1.55
LMBR1-216ENST00000477983 XRCC6P12956 609 aaKnown RBP eCLIP5.38□□□□□ -1.55
LMBR1-216ENST00000477983 MCM5P33992 734 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 U2AF1Q01081 240 aaKnown RBP eCLIP5.38□□□□□ -1.55
LMBR1-216ENST00000477983 ALDH1L2Q3SY69 923 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 TMEM119Q4V9L6 283 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 FAM160B1Q5W0V3 765 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 SMC5Q8IY18 1101 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 NGDNQ8NEJ9 315 aaKnown RBP5.38□□□□□ -1.55
LMBR1-216ENST00000477983 COG3Q96JB2 828 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 C22orf23Q9BZE7 217 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 PNPOQ9NVS9 261 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 DLL3Q9NYJ7 618 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 SH2B3Q9UQQ2 575 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 PCDHA1Q9Y5I3 950 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 CHD2O14647 1828 aaKnown RBP5.38□□□□□ -1.55
LMBR1-216ENST00000477983 TTC21BQ7Z4L5 1316 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 FNDC1Q4ZHG4 1894 aaPredicted RBP5.38□□□□□ -1.55
LMBR1-216ENST00000477983 NCOA3Q9Y6Q9 1424 aa5.38□□□□□ -1.55
LMBR1-216ENST00000477983 MON2Q7Z3U7 1717 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 TISP43B9A030 160 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 SLC16A3O15427 465 aaKnown RBP5.37□□□□□ -1.55
LMBR1-216ENST00000477983 TLR5O60602 858 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 BCAR3O75815 825 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 ONECUT2O95948 504 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 NHLRC4P0CG21 123 aaPredicted RBP5.37□□□□□ -1.55
LMBR1-216ENST00000477983 AKAP5P24588 427 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 PTGER1P34995 402 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 HSPA2P54652 639 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 TUBA4AP68366 448 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 CALD1Q05682 793 aaKnown RBP5.37□□□□□ -1.55
LMBR1-216ENST00000477983 CCDC173Q0VFZ6 552 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 MORN5Q5VZ52 161 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 ICE2Q659A1 982 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 TMEM108Q6UXF1 575 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 FAM46DQ8NEK8 389 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 ARHGAP45Q92619 1136 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 RPL36ALQ969Q0 106 aaKnown RBP5.37□□□□□ -1.55
LMBR1-216ENST00000477983 GCC1Q96CN9 775 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 MVB12AQ96EY5 273 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 PDCL3Q9H2J4 239 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 BHMT2Q9H2M3 363 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 GRPEL1Q9HAV7 217 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 TYW1Q9NV66 732 aaKnown RBP5.37□□□□□ -1.55
LMBR1-216ENST00000477983 HESX1Q9UBX0 185 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 IQSEC2Q5JU85 1478 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 SHPRHQ149N8 1683 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 TOPAZ1Q8N9V7 1692 aa5.37□□□□□ -1.55
LMBR1-216ENST00000477983 RGPD8O14715 1765 aaPredicted RBP5.37□□□□□ -1.55
LMBR1-216ENST00000477983 H0YIZ8 118 aa5.36□□□□□ -1.55
LMBR1-216ENST00000477983 MOSPD3O75425 235 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms