RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 IZUMO2Q6UXV1 221 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 RINLQ6ZS11 566 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 SAMD3Q8N6K7 520 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 MCUQ8NE86 351 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 OLIG1Q8TAK6 271 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 USP33Q8TEY7 942 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 SERAC1Q96JX3 654 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 ZNF214Q9UL59 606 aaPredicted RBP10.17□□□□□ -0.78
CMC1-209ENST00000477739 AIM2O14862 343 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 MAP3K13O43283 966 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 PEX1O43933 1283 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 LDHAP00338 332 aaKnown RBP10.17□□□□□ -0.78
CMC1-209ENST00000477739 IVDP26440 423 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 VCPP55072 806 aaKnown RBP10.17□□□□□ -0.78
CMC1-209ENST00000477739 SP2Q02086 613 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 ZRSR2Q15696 482 aaKnown RBP10.17□□□□□ -0.78
CMC1-209ENST00000477739 PTPN20Q4JDL3 420 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 TRMT10BQ6PF06 316 aaKnown RBP10.17□□□□□ -0.78
CMC1-209ENST00000477739 RAPH1Q70E73 1250 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 ACOT1Q86TX2 421 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 ZBTB8OSQ8IWT0 167 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 TNS4Q8IZW8 715 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 PPP4R1Q8TF05 950 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 DDX1Q92499 740 aaKnown RBP10.17□□□□□ -0.78
CMC1-209ENST00000477739 CD101Q93033 1021 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 EXT2Q93063 718 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 CPXM1Q96SM3 734 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 NMRK1Q9NWW6 199 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 SCOCQ9UIL1 159 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 SNX9Q9Y5X1 595 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 BRCA2P51587 3418 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 GNL1P36915 607 aaPredicted RBP10.17□□□□□ -0.78
CMC1-209ENST00000477739 AVPR1AP37288 418 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 ABL2P42684 1182 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 NEK3P51956 506 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 CUL3Q13618 768 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 FAM160B1Q5W0V3 765 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 CLNKQ7Z7G1 428 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 PNPLA1Q8N8W4 532 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 STK32AQ8WU08 396 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 SCYL1Q96KG9 808 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 EBF4Q9BQW3 602 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 PTPRHQ9HD43 1115 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 PLA2G4CQ9UP65 541 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 E5RJQ4 531 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 KCNK1O00180 336 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 NFKBIEO00221 500 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 RGS20O76081 388 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 HMGCRP04035 888 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 PRKCBP05771 671 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 CALB2P22676 271 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 POLR2BP30876 1174 aaKnown RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 TCF7P36402 384 aaPredicted RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 DRG2P55039 364 aaKnown RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 DUOXA2Q1HG44 320 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 LAYNQ6UX15 382 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 FAM131BQ86XD5 332 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 APOBEC3FQ8IUX4 373 aaKnown RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 RCOR2Q8IZ40 523 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 ZCCHC9Q8N567 271 aaKnown RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 NLRP7Q8WX94 980 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 CENPTQ96BT3 561 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 SRPK1Q96SB4 655 aaKnown RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 VPS33BQ9H267 617 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 ANLNQ9NQW6 1124 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 ZNF358Q9NW07 568 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 CACNG4Q9UBN1 327 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 CXorf49A8MYA2 514 aaPredicted RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 EDF1O60869 148 aaKnown RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 EDN1P05305 212 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 GSTA1P08263 222 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 UNGP13051 313 aaPredicted RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 SLC1A1P43005 524 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 LMNB2Q03252 620 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 POTEAQ6S8J7 498 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 ABHD15Q6UXT9 468 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 CDHR3Q6ZTQ4 885 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 GSTCDQ8NEC7 633 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 USP13Q92995 863 aaPredicted RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 ANKRD36BP1Q96IX9 119 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 HAPLN2Q9GZV7 340 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 TMPRSS4Q9NRS4 437 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 STOML1Q9UBI4 398 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 COQ4Q9Y3A0 265 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 ATP8B3O60423 1300 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 IQANK1A0A1B0GTG1 560 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 MYOCOSA0A1B0GUC4 107 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 TCRBV9S1A1TA0A576 114 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 PGM3O95394 542 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 TPH1P17752 444 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 GPX6P59796 221 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 BST1Q10588 318 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 TRIP10Q15642 601 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 ZACNQ401N2 412 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 ACSBG2Q5FVE4 666 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 LPCAT4Q643R3 524 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 MOB2Q70IA6 237 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 MON1BQ7L1V2 547 aa10.16□□□□□ -0.78
CMC1-209ENST00000477739 FBXO16Q8IX29 292 aaPredicted RBP10.16□□□□□ -0.78
CMC1-209ENST00000477739 EXD1Q8NHP7 514 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms