RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 DPYSL2Q16555 572 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 EMC10Q5UCC4 262 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 GLIS1Q8NBF1 620 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.73□□□□□ -0.37
PRPF39-203ENST00000477626 PGBD4Q96DM1 585 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 CFAP57Q96MR6 1250 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 PDCL3Q9H2J4 239 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 DDX43Q9NXZ2 648 aaKnown RBP12.73□□□□□ -0.37
PRPF39-203ENST00000477626 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
PRPF39-203ENST00000477626 DAB1O75553 588 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 POMCP01189 267 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 C15orf59Q2T9L4 293 aaPredicted RBP12.72□□□□□ -0.37
PRPF39-203ENST00000477626 RSPO2Q6UXX9 243 aaPredicted RBP12.72□□□□□ -0.37
PRPF39-203ENST00000477626 BBS12Q6ZW61 710 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 PIGZQ86VD9 579 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 RXFP2Q8WXD0 754 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 TRIM51Q9BSJ1 452 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 RHOBTB2Q9BYZ6 727 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 OSBPL8Q9BZF1 889 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 XIRP2A4UGR9 3374 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 PDGFRBP09619 1106 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 GPD1P21695 349 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 ACAT1P24752 427 aaKnown RBP12.72□□□□□ -0.37
PRPF39-203ENST00000477626 BRCC3P46736 316 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 GJA8P48165 433 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 PITX1P78337 314 aaPredicted RBP12.72□□□□□ -0.37
PRPF39-203ENST00000477626 SCAPQ12770 1279 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 TFDP3Q5H9I0 405 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 TMEM173Q86WV6 379 aaPredicted RBP12.72□□□□□ -0.37
PRPF39-203ENST00000477626 DEFB118Q96PH6 123 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 NAP1L3Q99457 506 aaPredicted RBP12.72□□□□□ -0.37
PRPF39-203ENST00000477626 DDX56Q9NY93 547 aaKnown RBP12.72□□□□□ -0.37
PRPF39-203ENST00000477626 DRG1Q9Y295 367 aaKnown RBP12.72□□□□□ -0.37
PRPF39-203ENST00000477626 NDUFV1P49821 464 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 MRPS5P82675 430 aaKnown RBP12.72□□□□□ -0.37
PRPF39-203ENST00000477626 GUCY2DQ02846 1103 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 CA9Q16790 459 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 HFE2Q6ZVN8 426 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 DDX42Q86XP3 938 aaKnown RBP eCLIP12.72□□□□□ -0.37
PRPF39-203ENST00000477626 PLD5Q8N7P1 536 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 OR6B3Q8NGW1 331 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 MAGEB5Q9BZ81 275 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 NRDE2Q9H7Z3 1164 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 EPB41L5Q9HCM4 733 aa12.72□□□□□ -0.37
PRPF39-203ENST00000477626 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
PRPF39-203ENST00000477626 SPOPO43791 374 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 CD19P15391 556 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 L1CAMP32004 1257 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 DNA2P51530 1060 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 EPHB4P54760 987 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 NOMO2Q5JPE7 1267 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 TMC3Q7Z5M5 1100 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 ANKLE1Q8NAG6 615 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 TNIP3Q96KP6 325 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 OLFM3Q96PB7 478 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 USP18Q9UMW8 372 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 NOTCH4Q99466 2003 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 TULP1O00294 542 aaPredicted RBP12.71□□□□□ -0.37
PRPF39-203ENST00000477626 HUS1O60921 280 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 ITGAVP06756 1048 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 GATMP50440 423 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 LBX1P52954 281 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 MDH1BQ5I0G3 518 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 STRADAQ7RTN6 431 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 ALLCQ8N6M5 410 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 DBF4BQ8NFT6 615 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 ZSCAN18Q8TBC5 510 aaPredicted RBP12.71□□□□□ -0.37
PRPF39-203ENST00000477626 KCNK16Q96T55 309 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 SYT15Q9BQS2 421 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 WDR83Q9BRX9 315 aaKnown RBP12.71□□□□□ -0.37
PRPF39-203ENST00000477626 FAM129AQ9BZQ8 928 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 ARFGAP3Q9NP61 516 aa12.71□□□□□ -0.37
PRPF39-203ENST00000477626 KBTBD13C9JR72 458 aa12.71□□□□□ -0.38
PRPF39-203ENST00000477626 DAOAP59103 153 aa12.71□□□□□ -0.38
PRPF39-203ENST00000477626 DR1Q01658 176 aa12.71□□□□□ -0.38
PRPF39-203ENST00000477626 CCDC137Q6PK04 289 aaKnown RBP12.71□□□□□ -0.38
PRPF39-203ENST00000477626 ATG4AQ8WYN0 398 aa12.71□□□□□ -0.38
PRPF39-203ENST00000477626 OGFRQ9NZT2 677 aa12.71□□□□□ -0.38
PRPF39-203ENST00000477626 MCM3P25205 808 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 MATKP42679 507 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 ACADSBP45954 432 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 RGS7P49802 495 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 ATXN1P54253 815 aaKnown RBP12.7□□□□□ -0.38
PRPF39-203ENST00000477626 SLC25A52Q3SY17 297 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 CCDC181Q5TID7 509 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 KLHL7Q8IXQ5 586 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 FZD10Q9ULW2 581 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 NFU1Q9UMS0 254 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 TNRC18O15417 2968 aaPredicted RBP12.7□□□□□ -0.38
PRPF39-203ENST00000477626 I3L4J1 428 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 DGKIO75912 1065 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 HSPA1AP0DMV8 641 aaKnown RBP12.7□□□□□ -0.38
PRPF39-203ENST00000477626 HSPA1BP0DMV9 641 aaKnown RBP12.7□□□□□ -0.38
PRPF39-203ENST00000477626 PSMA2P25787 234 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 RABGGTBP53611 331 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 TRIM60Q495X7 471 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 FAM102AQ5T9C2 384 aaPredicted RBP12.7□□□□□ -0.38
PRPF39-203ENST00000477626 KLHDC8BQ8IXV7 354 aa12.7□□□□□ -0.38
PRPF39-203ENST00000477626 NDRG1Q92597 394 aaKnown RBP12.7□□□□□ -0.38
PRPF39-203ENST00000477626 MYLPFQ96A32 169 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms