RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 SMYD4Q8IYR2 804 aaPredicted RBP16.65■□□□□ 0.26
CLDN11-204ENST00000477531 FMR1NBQ8N0W7 255 aaPredicted RBP16.65■□□□□ 0.26
CLDN11-204ENST00000477531 SCAMP5Q8TAC9 235 aa16.65■□□□□ 0.26
CLDN11-204ENST00000477531 GSDMAQ96QA5 445 aa16.65■□□□□ 0.26
CLDN11-204ENST00000477531 NIF3L1Q9GZT8 377 aa16.65■□□□□ 0.26
CLDN11-204ENST00000477531 FAM49BQ9NUQ9 324 aa16.65■□□□□ 0.26
CLDN11-204ENST00000477531 CFAP97Q9P2B7 532 aa16.65■□□□□ 0.26
CLDN11-204ENST00000477531 TBC1D14Q9P2M4 693 aa16.65■□□□□ 0.26
CLDN11-204ENST00000477531 USP18Q9UMW8 372 aa16.65■□□□□ 0.26
CLDN11-204ENST00000477531 OLFM2O95897 454 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 SDHBP21912 280 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 ADORA2BP29275 332 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 DMWDQ09019 674 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 INCA1Q0VD86 236 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 ZCWPW2Q504Y3 356 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 ZNF658Q5TYW1 1059 aaPredicted RBP16.64■□□□□ 0.25
CLDN11-204ENST00000477531 ERMP1Q7Z2K6 904 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.64■□□□□ 0.25
CLDN11-204ENST00000477531 TTC39CQ8N584 583 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 CAMKK1Q8N5S9 505 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 C12orf29Q8N999 325 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 TAS1R2Q8TE23 839 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 SMARCE1Q969G3 411 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 ACDQ96AP0 544 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 CYFIP2Q96F07 1278 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 FBRSL1Q9HCM7 1045 aaKnown RBP16.64■□□□□ 0.25
CLDN11-204ENST00000477531 TLR8Q9NR97 1041 aaKnown RBP16.64■□□□□ 0.25
CLDN11-204ENST00000477531 IL37Q9NZH6 218 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 SH3BP1Q9Y3L3 701 aa16.64■□□□□ 0.25
CLDN11-204ENST00000477531 CCDC163A0A0D9SF12 145 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 TNFRSF10BO14763 440 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 COCHO43405 550 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 HRO43593 1189 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 ADH1CP00326 375 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 RETP07949 1114 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 CD58P19256 250 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 MXI1P50539 228 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 TUBP50607 506 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 ZXDBP98169 803 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 STIM1Q13586 685 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 SNX30Q5VWJ9 437 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 ADGRG2Q8IZP9 1017 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 RPLP0P6Q8NHW5 317 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 FAXDC2Q96IV6 333 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 HNRNPABQ99729 332 aaKnown RBP16.63■□□□□ 0.25
CLDN11-204ENST00000477531 SMOQ99835 787 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 APOBEC3GQ9HC16 384 aaKnown RBP16.63■□□□□ 0.25
CLDN11-204ENST00000477531 CSNK1G1Q9HCP0 422 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 C2orf42Q9NWW7 574 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 GMIPQ9P107 970 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 HMGXB4Q9UGU5 601 aa16.63■□□□□ 0.25
CLDN11-204ENST00000477531 E2F8A0AVK6 867 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 PRR5-ARHGAP8B1AHC4 643 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 PRCPP42785 496 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 ARHGAP8P85298 464 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 FKBP3Q00688 224 aaKnown RBP16.62■□□□□ 0.25
CLDN11-204ENST00000477531 LMNB2Q03252 620 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 GOLGA8FQ08AF8 430 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 GOLGA8DPQ0D2H9 430 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 PUM1Q14671 1186 aaKnown RBP eCLIP16.62■□□□□ 0.25
CLDN11-204ENST00000477531 DHCR24Q15392 516 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 TCERG1LQ5VWI1 586 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 NAIF1Q69YI7 327 aaPredicted RBP16.62■□□□□ 0.25
CLDN11-204ENST00000477531 PKN3Q6P5Z2 889 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 FBXL13Q8NEE6 735 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 RMDN1Q96DB5 314 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 OTUB2Q96DC9 234 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 EEF2KMTQ96G04 330 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 TIGD1Q96MW7 591 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 RAB20Q9NX57 234 aa16.62■□□□□ 0.25
CLDN11-204ENST00000477531 MYH10P35580 1976 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 FAM92AA1XBS5 289 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 TLR5O60602 858 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 LRP3O75074 770 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 CILPO75339 1184 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 BEST1O76090 585 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 CYP17A1P05093 508 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 ZDHHC11BP0C7U3 371 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 CCDC192P0DO97 292 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 SRSF5Q13243 272 aaKnown RBP16.61■□□□□ 0.25
CLDN11-204ENST00000477531 PREPLQ4J6C6 727 aaPredicted RBP16.61■□□□□ 0.25
CLDN11-204ENST00000477531 COBLL1Q53SF7 1204 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 DCAF17Q5H9S7 520 aaPredicted RBP16.61■□□□□ 0.25
CLDN11-204ENST00000477531 SYT13Q7L8C5 426 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 ZMIZ2Q8NF64 920 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 JAKMIP2Q96AA8 810 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 HEXIM2Q96MH2 286 aaKnown RBP16.61■□□□□ 0.25
CLDN11-204ENST00000477531 CCSER2Q9H7U1 834 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 PNPLA8Q9NP80 782 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 PCDHA5Q9Y5H7 936 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 ATG2BQ96BY7 2078 aa16.61■□□□□ 0.25
CLDN11-204ENST00000477531 HELZP42694 1942 aaKnown RBP16.6■□□□□ 0.25
CLDN11-204ENST00000477531 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.6■□□□□ 0.25
CLDN11-204ENST00000477531 SCAMP3O14828 347 aaKnown RBP16.6■□□□□ 0.25
CLDN11-204ENST00000477531 SLC16A3O15427 465 aaKnown RBP16.6■□□□□ 0.25
CLDN11-204ENST00000477531 RPP40O75818 363 aaKnown RBP16.6■□□□□ 0.25
CLDN11-204ENST00000477531 APBB3O95704 486 aa16.6■□□□□ 0.25
CLDN11-204ENST00000477531 APODP05090 189 aa16.6■□□□□ 0.25
CLDN11-204ENST00000477531 ADH5P11766 374 aa16.6■□□□□ 0.25
CLDN11-204ENST00000477531 ACO1P21399 889 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms