RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 ANO5Q75V66 913 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 PALM2Q8IXS6 379 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 DDI1Q8WTU0 396 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 SLC44A1Q8WWI5 657 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 CDCA5Q96FF9 252 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 RPAP3Q9H6T3 665 aaPredicted RBP15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 EHMT1Q9H9B1 1298 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 EXOC7Q9UPT5 735 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 CLEC11AQ9Y240 323 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 CTDP1Q9Y5B0 961 aaPredicted RBP15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 PHIPQ8WWQ0 1821 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 WDR90Q96KV7 1748 aa15.88■□□□□ 0.13
CLSTN1-205ENST00000477264 GOLGA8RI6L899 631 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 SGK1O00141 431 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 VILLO15195 856 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 CLPTM1O96005 669 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 CPOXP36551 454 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 GTF2BQ00403 316 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 KDSRQ06136 332 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 BTKQ06187 659 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 WASHC5Q12768 1159 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 DGKZQ13574 1117 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 VGLL4Q14135 290 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 SH2D5Q6ZV89 423 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 CRLF3Q8IUI8 442 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 FBXO36Q8NEA4 188 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 CLMNQ96JQ2 1002 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 NLRP4Q96MN2 994 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 RBM38Q9H0Z9 239 aaKnown RBP15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 USP29Q9HBJ7 922 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 RHBDL2Q9NX52 303 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 DDX56Q9NY93 547 aaKnown RBP15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 CHMP2BQ9UQN3 213 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 COPEO14579 308 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 FAM163BP0C2L3 166 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 HMGCS2P54868 508 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 ADARP55265 1226 aaKnown RBP15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 TBL3Q12788 808 aaKnown RBP15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 OLFML2BQ68BL8 750 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 SPOCD1Q6ZMY3 1216 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 RBM44Q6ZP01 1051 aaKnown RBP15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 PHF13Q86YI8 300 aaPredicted RBP15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 RHPN2Q8IUC4 686 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 TMEM126BQ8IUX1 230 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 AHI1Q8N157 1196 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 PDIK1LQ8N165 341 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 NAT8LQ8N9F0 302 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 CATSPER1Q8NEC5 780 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 FBXO27Q8NI29 283 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 CLPTM1LQ96KA5 538 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 FAM96AQ9H5X1 160 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 ALG13Q9NP73 1137 aaKnown RBP15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 PADI4Q9UM07 663 aa15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 MRPL11Q9Y3B7 192 aaKnown RBP15.87■□□□□ 0.13
CLSTN1-205ENST00000477264 CHMP2AO43633 222 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 LGR5O75473 907 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 KLHL2O95198 593 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 ATF7P17544 494 aaPredicted RBP15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 ZNF200P98182 395 aaPredicted RBP15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 C1QBPQ07021 282 aaKnown RBP15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 SNRNP35Q16560 246 aaKnown RBP15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 NUP93Q8N1F7 819 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 TTC13Q8NBP0 860 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 SLC35B2Q8TB61 432 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 E2F7Q96AV8 911 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 SENP7Q9BQF6 1050 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 LXNQ9BS40 222 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 ZNF696Q9H7X3 374 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 C1orf112Q9NSG2 853 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 SIRPGQ9P1W8 387 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 ITGA11Q9UKX5 1188 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 SF3B1O75533 1304 aaKnown RBP eCLIP15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 hCG_1818297A0A087WSY0 165 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 C2orf71A6NGG8 1288 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 TTLL13PA6NNM8 815 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 TNFAIP8O95379 198 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 ETS1P14921 441 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 PEX2P28328 305 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 GJC1P36383 396 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 FDFT1P37268 417 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 TMPRSS15P98073 1019 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 PLCB3Q01970 1234 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 DLG1Q12959 904 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 MAMLD1Q13495 774 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 TFDP3Q5H9I0 405 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 OGFRL1Q5TC84 451 aaPredicted RBP15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 TTC39BQ5VTQ0 682 aaPredicted RBP15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 KLHDC10Q6PID8 442 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 PADI6Q6TGC4 694 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 GSTCDQ8NEC7 633 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 C12orf42Q96LP6 360 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 KLF6Q99612 283 aaPredicted RBP15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 TEKT3Q9BXF9 490 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 RAB26Q9ULW5 256 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 EFR3BQ9Y2G0 817 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 WDR37Q9Y2I8 494 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 AFG3L2Q9Y4W6 797 aa15.86■□□□□ 0.13
CLSTN1-205ENST00000477264 DCAF8L1A6NGE4 600 aa15.85■□□□□ 0.13
CLSTN1-205ENST00000477264 E5RJQ4 531 aa15.85■□□□□ 0.13
CLSTN1-205ENST00000477264 BIRC5O15392 142 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms