RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 CES2O00748 559 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 ACOT8O14734 319 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 FTLP02792 175 aaPredicted RBP3.24□□□□□ -1.89
XRN1-211ENST00000477237 PRKCBP05771 671 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 HDCP19113 662 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 PDE6CP51160 858 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 COPB1P53618 953 aaKnown RBP3.24□□□□□ -1.89
XRN1-211ENST00000477237 SATB1Q01826 763 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 NFATC4Q14934 902 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 OTUD3Q5T2D3 398 aaPredicted RBP3.24□□□□□ -1.89
XRN1-211ENST00000477237 THEMIS2Q5TEJ8 643 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 HIST2H2BCQ6DN03 193 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 ANO7Q6IWH7 933 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 NOP9Q86U38 636 aaKnown RBP3.24□□□□□ -1.89
XRN1-211ENST00000477237 CNPY4Q8N129 248 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 MIER2Q8N344 545 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 OSCP1Q8WVF1 389 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 SOCS4Q8WXH5 440 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 SLC25A28Q96A46 364 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 NLRP4Q96MN2 994 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 TMEM8AQ9HCN3 771 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 SEMA4BQ9NPR2 832 aaPredicted RBP3.24□□□□□ -1.89
XRN1-211ENST00000477237 LPAR3Q9UBY5 353 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 CADPSQ9ULU8 1353 aa3.24□□□□□ -1.89
XRN1-211ENST00000477237 TLDC2A0PJX2 215 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 H3BUI4 141 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 GRPP07492 148 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 HSD3B2P26439 372 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 FXR1P51114 621 aaKnown RBP eCLIP3.23□□□□□ -1.89
XRN1-211ENST00000477237 PSG6Q00889 435 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 KRT17Q04695 432 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 ITKQ08881 620 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 TMEM65Q6PI78 240 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 ZNF280BQ86YH2 543 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 SIRT6Q8N6T7 355 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 NUDCD2Q8WVJ2 157 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 MOGAT1Q96PD6 335 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 PRR25Q96S07 402 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 CCDC8Q9H0W5 538 aaPredicted RBP3.23□□□□□ -1.89
XRN1-211ENST00000477237 PNPOQ9NVS9 261 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 TRHDEQ9UKU6 1024 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 AMFRQ9UKV5 643 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 SHOC2Q9UQ13 582 aa3.23□□□□□ -1.89
XRN1-211ENST00000477237 FGAP02671 866 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 MYCLP12524 364 aaPredicted RBP3.22□□□□□ -1.89
XRN1-211ENST00000477237 TYRP14679 529 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 RHCEP18577 417 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 CCND1P24385 295 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 CDC25AP30304 524 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 HK3P52790 923 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 ADKP55263 362 aaKnown RBP3.22□□□□□ -1.89
XRN1-211ENST00000477237 RPL36AP83881 106 aaKnown RBP3.22□□□□□ -1.89
XRN1-211ENST00000477237 MYO1EQ12965 1108 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 ODF1Q14990 250 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 SYDE2Q5VT97 1194 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 DDX42Q86XP3 938 aaKnown RBP eCLIP3.22□□□□□ -1.89
XRN1-211ENST00000477237 C16orf71Q8IYS4 520 aaPredicted RBP3.22□□□□□ -1.89
XRN1-211ENST00000477237 IZUMO1Q8IYV9 350 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 BRIX1Q8TDN6 353 aaKnown RBP3.22□□□□□ -1.89
XRN1-211ENST00000477237 IPO4Q8TEX9 1081 aaKnown RBP3.22□□□□□ -1.89
XRN1-211ENST00000477237 WIPF2Q8TF74 440 aaPredicted RBP3.22□□□□□ -1.89
XRN1-211ENST00000477237 TMEM171Q8WVE6 324 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 ARHGAP39Q9C0H5 1083 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 CXorf36Q9H7Y0 433 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 USP35Q9P2H5 1018 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 XPR1Q9UBH6 696 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 NAP1L2Q9ULW6 460 aaPredicted RBP3.22□□□□□ -1.89
XRN1-211ENST00000477237 PCDHA6Q9UN73 950 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.22□□□□□ -1.89
XRN1-211ENST00000477237 EVPLQ92817 2033 aa3.22□□□□□ -1.89
XRN1-211ENST00000477237 ARID4BQ4LE39 1312 aaPredicted RBP3.21□□□□□ -1.89
XRN1-211ENST00000477237 SHTN1A0MZ66 631 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 MYO1CO00159 1063 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 PSMD9O00233 223 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 ZNF432O94892 652 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 MT-CO3P00414 261 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 CSF1RP07333 972 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 PDCP20941 246 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 ARRB2P32121 409 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 MAP2K6P52564 334 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 PRKAG1P54619 331 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 SOX8P57073 446 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 MLC1Q15049 377 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 KHDC1LQ5JSQ8 128 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 MANEAQ5SRI9 462 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 ABRAQ8N0Z2 381 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 MTMR8Q96EF0 704 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 HS6ST2Q96MM7 605 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 MYLK2Q9H1R3 596 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 TMX2Q9Y320 296 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 PLEKHM1Q9Y4G2 1056 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 SNX14Q9Y5W7 946 aa3.21□□□□□ -1.9
XRN1-211ENST00000477237 FER1L4A9Z1Z3 1794 aa3.2□□□□□ -1.9
XRN1-211ENST00000477237 PPM1GO15355 546 aaPredicted RBP3.2□□□□□ -1.9
XRN1-211ENST00000477237 SLC16A6O15403 523 aa3.2□□□□□ -1.9
XRN1-211ENST00000477237 DTNBO60941 627 aa3.2□□□□□ -1.9
XRN1-211ENST00000477237 VIL1P09327 827 aaKnown RBP3.2□□□□□ -1.9
XRN1-211ENST00000477237 MCCP23508 829 aa3.2□□□□□ -1.9
XRN1-211ENST00000477237 LRPAP1P30533 357 aa3.2□□□□□ -1.9
XRN1-211ENST00000477237 UCP3P55916 312 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms