RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 EXD1Q8NHP7 514 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 CENPIQ92674 756 aaPredicted RBP15.15■□□□□ 0.02
COL4A6-206ENST00000477085 BADQ92934 168 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 DDX47Q9H0S4 455 aaKnown RBP15.15■□□□□ 0.02
COL4A6-206ENST00000477085 PLEKHA4Q9H4M7 779 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 ZWILCHQ9H900 591 aa15.15■□□□□ 0.02
COL4A6-206ENST00000477085 YJEFN3A6XGL0 299 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 E7ENQ6 273 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 VNN2O95498 520 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 USP17L7P0C7H9 530 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 RALAP11233 206 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 PCK1P35558 622 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 ALDH7A1P49419 539 aaKnown RBP15.14■□□□□ 0.01
COL4A6-206ENST00000477085 ATXN1P54253 815 aaKnown RBP15.14■□□□□ 0.01
COL4A6-206ENST00000477085 HDAC4P56524 1084 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 PITX1P78337 314 aaPredicted RBP15.14■□□□□ 0.01
COL4A6-206ENST00000477085 MAPRE1Q15691 268 aaKnown RBP15.14■□□□□ 0.01
COL4A6-206ENST00000477085 CTXN3Q4LDR2 81 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 SEL1L2Q5TEA6 688 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 OTUD1Q5VV17 481 aaPredicted RBP15.14■□□□□ 0.01
COL4A6-206ENST00000477085 MFSD7Q6UXD7 560 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 SLITRK1Q96PX8 696 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 DDX23Q9BUQ8 820 aaKnown RBP15.14■□□□□ 0.01
COL4A6-206ENST00000477085 HEMGNQ9BXL5 484 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 ASNSD1Q9NWL6 643 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 RAB21Q9UL25 225 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 USP18Q9UMW8 372 aa15.14■□□□□ 0.01
COL4A6-206ENST00000477085 TNFRSF10BO14763 440 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 SART1O43290 800 aaKnown RBP15.13■□□□□ 0.01
COL4A6-206ENST00000477085 RAD51CO43502 376 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 CD48P09326 243 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 DAOAP59103 153 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 VSNL1P62760 191 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 KLF1Q13351 362 aaPredicted RBP15.13■□□□□ 0.01
COL4A6-206ENST00000477085 EFHC1Q5JVL4 640 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 SYPL2Q5VXT5 272 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 PRSS55Q6UWB4 352 aaPredicted RBP15.13■□□□□ 0.01
COL4A6-206ENST00000477085 POLNQ7Z5Q5 900 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 SPATA2LQ8IUW3 424 aaPredicted RBP15.13■□□□□ 0.01
COL4A6-206ENST00000477085 RCOR2Q8IZ40 523 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 DEFB106AQ8N104 65 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 SIX6OS1Q8N1H7 587 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 TTC9BQ8N6N2 239 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 SCAMP5Q8TAC9 235 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 FAM172AQ8WUF8 416 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 IGSF21Q96ID5 467 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 PGLYRP2Q96PD5 576 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 DMAP1Q9NPF5 467 aaPredicted RBP15.13■□□□□ 0.01
COL4A6-206ENST00000477085 MRPL42Q9Y6G3 142 aaKnown RBP15.13■□□□□ 0.01
COL4A6-206ENST00000477085 ALPK3Q96L96 1907 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 ADAM12O43184 909 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 RNF8O76064 485 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 KRT1P04264 644 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 GLI1P08151 1106 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 KRT10P13645 584 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 SDC4P31431 198 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 PTPN9P43378 593 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 GPR15P49685 360 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 YWHAZP63104 245 aaKnown RBP15.13■□□□□ 0.01
COL4A6-206ENST00000477085 PM20D1Q6GTS8 502 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 TTC27Q6P3X3 843 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 KCNT2Q6UVM3 1135 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 C4orf50Q6ZRC1 276 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 ZNF365Q70YC5 407 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 ATAD1Q8NBU5 361 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 CMASQ8NFW8 434 aaPredicted RBP15.13■□□□□ 0.01
COL4A6-206ENST00000477085 NT5C3BQ969T7 300 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 SLC2A13Q96QE2 648 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 TTPALQ9BTX7 342 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 CRISPLD1Q9H336 500 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 CNGB3Q9NQW8 809 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 ABI2Q9NYB9 513 aaPredicted RBP15.13■□□□□ 0.01
COL4A6-206ENST00000477085 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.13■□□□□ 0.01
COL4A6-206ENST00000477085 R3HDM2Q9Y2K5 976 aaKnown RBP15.13■□□□□ 0.01
COL4A6-206ENST00000477085 USP3Q9Y6I4 520 aa15.13■□□□□ 0.01
COL4A6-206ENST00000477085 ZSCAN5CA6NGD5 496 aaPredicted RBP15.12■□□□□ 0.01
COL4A6-206ENST00000477085 CCDC188H7C350 402 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 HSF2BPO75031 334 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 BAIAP3O94812 1187 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 ZBED1O96006 694 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 MATKP42679 507 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 CDKN2BP42772 138 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 PGFP49763 221 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 ARSEP51690 589 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 TRADDQ15628 312 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 SDHAF4Q5VUM1 108 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 ZNF280DQ6N043 979 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 SPOCD1Q6ZMY3 1216 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 BNIPLQ7Z465 357 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 CCDC50Q8IVM0 306 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 DCP1BQ8IZD4 617 aaKnown RBP15.12■□□□□ 0.01
COL4A6-206ENST00000477085 STKLD1Q8NE28 680 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 FAM149B1Q96BN6 582 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 TBCBQ99426 244 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 NAP1L3Q99457 506 aaPredicted RBP15.12■□□□□ 0.01
COL4A6-206ENST00000477085 MAGEB5Q9BZ81 275 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 OSBPL8Q9BZF1 889 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 NGRNQ9NPE2 291 aaKnown RBP15.12■□□□□ 0.01
COL4A6-206ENST00000477085 CHST7Q9NS84 486 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 CXXC1Q9P0U4 656 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms