RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 PRPSAP2O60256 369 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 CCDC130P13994 396 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 CYP2B6P20813 491 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 RGS2P41220 211 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 PNPLA4P41247 253 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 HDAC4P56524 1084 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 BST2Q10589 180 aaKnown RBP12.01□□□□□ -0.49
NUP188-205ENST00000477069 MPP2Q14168 576 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 PDK2Q15119 407 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 CDO1Q16878 200 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 FAM47CQ5HY64 1035 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 CYP4F22Q6NT55 531 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 TBCBQ99426 244 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 UBN1Q9NPG3 1134 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 HESX1Q9UBX0 185 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 TCRBV7S3A2A0A539 114 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 DCAF8L1A6NGE4 600 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 MDM4O15151 490 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 TMEM63AO94886 807 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 RBP3P10745 1247 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 MAGEA9P43362 315 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 PTPN9P43378 593 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 GPX6P59796 221 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 FSCN1Q16658 493 aaKnown RBP12.01□□□□□ -0.49
NUP188-205ENST00000477069 MSS51Q4VC12 460 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 BOLA3Q53S33 107 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 FNBP1LQ5T0N5 605 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 SLC9A4Q6AI14 798 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 MICALCLQ6ZW33 695 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 CENPUQ71F23 418 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 SLC26A9Q7LBE3 791 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 PLD5Q8N7P1 536 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 SPATA18Q8TC71 538 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 CLEC4CQ8WTT0 213 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 RSAD2Q8WXG1 361 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 RTP4Q96DX8 246 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 GOLGA2P5Q9HBQ8 144 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 PCDH18Q9HCL0 1135 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.01□□□□□ -0.49
NUP188-205ENST00000477069 CLUHO75153 1309 aa12.01□□□□□ -0.49
NUP188-205ENST00000477069 PTGESO14684 152 aa12□□□□□ -0.49
NUP188-205ENST00000477069 MCF2LO15068 1137 aa12□□□□□ -0.49
NUP188-205ENST00000477069 TFE3P19532 575 aaPredicted RBP12□□□□□ -0.49
NUP188-205ENST00000477069 CTGFP29279 349 aa12□□□□□ -0.49
NUP188-205ENST00000477069 LRPAP1P30533 357 aa12□□□□□ -0.49
NUP188-205ENST00000477069 SDC4P31431 198 aa12□□□□□ -0.49
NUP188-205ENST00000477069 GNL1P36915 607 aaPredicted RBP12□□□□□ -0.49
NUP188-205ENST00000477069 BCAT1P54687 386 aa12□□□□□ -0.49
NUP188-205ENST00000477069 ATP11AP98196 1134 aa12□□□□□ -0.49
NUP188-205ENST00000477069 TFDP2Q14188 446 aa12□□□□□ -0.49
NUP188-205ENST00000477069 RASA2Q15283 850 aa12□□□□□ -0.49
NUP188-205ENST00000477069 HIF1AQ16665 826 aa12□□□□□ -0.49
NUP188-205ENST00000477069 CA9Q16790 459 aa12□□□□□ -0.49
NUP188-205ENST00000477069 ZC3H12AQ5D1E8 599 aaKnown RBP12□□□□□ -0.49
NUP188-205ENST00000477069 FAM228AQ86W67 206 aa12□□□□□ -0.49
NUP188-205ENST00000477069 IFNL1Q8IU54 200 aa12□□□□□ -0.49
NUP188-205ENST00000477069 ZBED8Q8IZ13 594 aa12□□□□□ -0.49
NUP188-205ENST00000477069 FAM71DQ8N9W8 422 aa12□□□□□ -0.49
NUP188-205ENST00000477069 TRPV1Q8NER1 839 aa12□□□□□ -0.49
NUP188-205ENST00000477069 SOCS4Q8WXH5 440 aa12□□□□□ -0.49
NUP188-205ENST00000477069 CCDC77Q9BR77 488 aa12□□□□□ -0.49
NUP188-205ENST00000477069 SNRNP25Q9BV90 132 aaKnown RBP12□□□□□ -0.49
NUP188-205ENST00000477069 AP5M1Q9H0R1 490 aa12□□□□□ -0.49
NUP188-205ENST00000477069 USP29Q9HBJ7 922 aa12□□□□□ -0.49
NUP188-205ENST00000477069 GTF2IRD1Q9UHL9 959 aa12□□□□□ -0.49
NUP188-205ENST00000477069 MYADML2A6NDP7 307 aa12□□□□□ -0.49
NUP188-205ENST00000477069 SMAPO00193 183 aa12□□□□□ -0.49
NUP188-205ENST00000477069 XPOTO43592 962 aaKnown RBP12□□□□□ -0.49
NUP188-205ENST00000477069 BANF1O75531 89 aa12□□□□□ -0.49
NUP188-205ENST00000477069 CAPN15O75808 1086 aa12□□□□□ -0.49
NUP188-205ENST00000477069 TAF6P49848 677 aa12□□□□□ -0.49
NUP188-205ENST00000477069 PDIA2Q13087 525 aaKnown RBP12□□□□□ -0.49
NUP188-205ENST00000477069 SV2CQ496J9 727 aa12□□□□□ -0.49
NUP188-205ENST00000477069 ANKRD20A8PQ5CZ79 823 aa12□□□□□ -0.49
NUP188-205ENST00000477069 PIGWQ7Z7B1 504 aa12□□□□□ -0.49
NUP188-205ENST00000477069 TADA2BQ86TJ2 420 aa12□□□□□ -0.49
NUP188-205ENST00000477069 CCDC13Q8IYE1 715 aa12□□□□□ -0.49
NUP188-205ENST00000477069 C10orf67Q8IYJ2 551 aa12□□□□□ -0.49
NUP188-205ENST00000477069 C7orf31Q8N865 590 aa12□□□□□ -0.49
NUP188-205ENST00000477069 COL4A4P53420 1690 aaPredicted RBP12□□□□□ -0.49
NUP188-205ENST00000477069 TGM2P21980 687 aa12□□□□□ -0.49
NUP188-205ENST00000477069 WARSP23381 471 aaKnown RBP12□□□□□ -0.49
NUP188-205ENST00000477069 TKTP29401 623 aaKnown RBP12□□□□□ -0.49
NUP188-205ENST00000477069 ZNF157P51786 506 aaPredicted RBP12□□□□□ -0.49
NUP188-205ENST00000477069 NRLP54845 237 aa12□□□□□ -0.49
NUP188-205ENST00000477069 SNX16P57768 344 aa12□□□□□ -0.49
NUP188-205ENST00000477069 ROR1Q01973 937 aa12□□□□□ -0.49
NUP188-205ENST00000477069 OSTM1Q86WC4 334 aa12□□□□□ -0.49
NUP188-205ENST00000477069 LRRC34Q8IZ02 419 aa12□□□□□ -0.49
NUP188-205ENST00000477069 TOP6BLQ8N6T0 577 aa12□□□□□ -0.49
NUP188-205ENST00000477069 PCDH19Q8TAB3 1148 aa12□□□□□ -0.49
NUP188-205ENST00000477069 PPP1R10Q96QC0 940 aaKnown RBP12□□□□□ -0.49
NUP188-205ENST00000477069 ZNF670Q9BS34 389 aa12□□□□□ -0.49
NUP188-205ENST00000477069 GPATCH2LQ9NWQ4 482 aa12□□□□□ -0.49
NUP188-205ENST00000477069 FETUBQ9UGM5 382 aa12□□□□□ -0.49
NUP188-205ENST00000477069 EXOC1LA0A1B0GW35 172 aa11.99□□□□□ -0.49
NUP188-205ENST00000477069 PDGFRBP09619 1106 aa11.99□□□□□ -0.49
NUP188-205ENST00000477069 BRAFP15056 766 aa11.99□□□□□ -0.49
NUP188-205ENST00000477069 STIP1P31948 543 aaKnown RBP11.99□□□□□ -0.49
NUP188-205ENST00000477069 LILRA4P59901 499 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms