RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 PCDHGB2Q9Y5G2 931 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 AK5Q9Y6K8 562 aa16.44■□□□□ 0.22
SMG5-204ENST00000476954 DOPEY2Q9Y3R5 2298 aa16.43■□□□□ 0.22
SMG5-204ENST00000476954 KCNK3O14649 394 aa16.43■□□□□ 0.22
SMG5-204ENST00000476954 SLC9A3R1O14745 358 aaPredicted RBP16.43■□□□□ 0.22
SMG5-204ENST00000476954 TRIM66O15016 1216 aa16.43■□□□□ 0.22
SMG5-204ENST00000476954 PFKFB2O60825 505 aa16.43■□□□□ 0.22
SMG5-204ENST00000476954 CD6P30203 668 aa16.43■□□□□ 0.22
SMG5-204ENST00000476954 LIG4P49917 911 aa16.43■□□□□ 0.22
SMG5-204ENST00000476954 IRX6P78412 446 aaPredicted RBP16.43■□□□□ 0.22
SMG5-204ENST00000476954 TRMT11Q7Z4G4 463 aaKnown RBP16.43■□□□□ 0.22
SMG5-204ENST00000476954 TERB1Q8NA31 727 aa16.43■□□□□ 0.22
SMG5-204ENST00000476954 WASF1Q92558 559 aa16.43■□□□□ 0.22
SMG5-204ENST00000476954 PDRG1Q9NUG6 133 aa16.43■□□□□ 0.22
SMG5-204ENST00000476954 DDX43Q9NXZ2 648 aaKnown RBP16.43■□□□□ 0.22
SMG5-204ENST00000476954 L1RE1Q9UN81 338 aa16.43■□□□□ 0.22
SMG5-204ENST00000476954 NUMA1Q14980 2115 aa16.43■□□□□ 0.22
SMG5-204ENST00000476954 NPHP3-ACAD11A0A0J9YXS1 232 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 BCAT2O15382 392 aaPredicted RBP16.42■□□□□ 0.22
SMG5-204ENST00000476954 ZBTB24O43167 697 aaPredicted RBP16.42■□□□□ 0.22
SMG5-204ENST00000476954 WISP1O95388 367 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 CSNK1EP49674 416 aaKnown RBP16.42■□□□□ 0.22
SMG5-204ENST00000476954 ACOT2P49753 483 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 TLE3Q04726 772 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 GAD2Q05329 585 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 CCDC173Q0VFZ6 552 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 LY6DQ14210 128 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 DCAF12L1Q5VU92 463 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 SLC39A4Q6P5W5 647 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 TMPRSS12Q86WS5 348 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 SPATA2LQ8IUW3 424 aaPredicted RBP16.42■□□□□ 0.22
SMG5-204ENST00000476954 CHPFQ8IZ52 775 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 KCNV2Q8TDN2 545 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 MSTO1Q9BUK6 570 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 WSB2Q9NYS7 404 aaPredicted RBP16.42■□□□□ 0.22
SMG5-204ENST00000476954 TRPM5Q9NZQ8 1165 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 DEC1Q9P2X7 70 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 EIF2B4Q9UI10 523 aaKnown RBP16.42■□□□□ 0.22
SMG5-204ENST00000476954 DNM3Q9UQ16 869 aa16.42■□□□□ 0.22
SMG5-204ENST00000476954 TP53BP1Q12888 1972 aaPredicted RBP16.41■□□□□ 0.22
SMG5-204ENST00000476954 A0A0B4J269 797 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 ZNF840PA6NDX5 716 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 CAPN8A6NHC0 703 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 KCNJ18B7U540 433 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 B8ZZF3 427 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 WASH3PC4AMC7 463 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 CBX4O00257 560 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 HNRNPDLO14979 420 aaKnown RBP16.41■□□□□ 0.22
SMG5-204ENST00000476954 ATP2C2O75185 946 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 OLFM2O95897 454 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 ABL1P00519 1130 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 CDC25AP30304 524 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 PDE6CP51160 858 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 SMTNP53814 917 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 KYAT1Q16773 422 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 KIF19Q2TAC6 998 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 SV2CQ496J9 727 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 CD302Q8IX05 232 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 C1orf216Q8TAB5 229 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 SNIP1Q8TAD8 396 aaKnown RBP16.41■□□□□ 0.22
SMG5-204ENST00000476954 WBP2Q969T9 261 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 FAM84AQ96KN4 292 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 GABRG3Q99928 467 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 ACBD6Q9BR61 282 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 TRIM9Q9C026 710 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 DERAQ9Y315 318 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 SNX11Q9Y5W9 270 aa16.41■□□□□ 0.22
SMG5-204ENST00000476954 TISP43B9A030 160 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 PRRT4C9JH25 899 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 ERVH48-1M5A8F1 160 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 JUPP14923 745 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 GUCY2CP25092 1073 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 FXR2P51116 673 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMG5-204ENST00000476954 GUCY1B3Q02153 619 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 CFAP221Q4G0U5 840 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 C6orf118Q5T5N4 469 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 IL27RAQ6UWB1 636 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 TMEM25Q86YD3 366 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 SPACA3Q8IXA5 215 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 C4orf32Q8N8J7 132 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 NECAB1Q8N987 351 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 BAP1Q92560 729 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 STARD13Q9Y3M8 1113 aa16.4■□□□□ 0.22
SMG5-204ENST00000476954 UBR5O95071 2799 aaPredicted RBP16.4■□□□□ 0.22
SMG5-204ENST00000476954 HOXC11O43248 304 aaPredicted RBP16.39■□□□□ 0.21
SMG5-204ENST00000476954 OAS1P00973 400 aaKnown RBP16.39■□□□□ 0.21
SMG5-204ENST00000476954 MBL2P11226 248 aaPredicted RBP16.39■□□□□ 0.21
SMG5-204ENST00000476954 NCKAP1LP55160 1127 aa16.39■□□□□ 0.21
SMG5-204ENST00000476954 IL9RQ01113 521 aa16.39■□□□□ 0.21
SMG5-204ENST00000476954 TARDBPQ13148 414 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMG5-204ENST00000476954 SUZ12Q15022 739 aaKnown RBP16.39■□□□□ 0.21
SMG5-204ENST00000476954 ANO4Q32M45 955 aa16.39■□□□□ 0.21
SMG5-204ENST00000476954 BTBD8Q5XKL5 378 aa16.39■□□□□ 0.21
SMG5-204ENST00000476954 SDE2Q6IQ49 451 aa16.39■□□□□ 0.21
SMG5-204ENST00000476954 LAYNQ6UX15 382 aa16.39■□□□□ 0.21
SMG5-204ENST00000476954 KIAA1958Q8N8K9 716 aa16.39■□□□□ 0.21
SMG5-204ENST00000476954 METTL12A8MUP2 240 aa16.38■□□□□ 0.21
SMG5-204ENST00000476954 ANKRD63C9JTQ0 380 aa16.38■□□□□ 0.21
SMG5-204ENST00000476954 SLC28A2O43868 658 aa16.38■□□□□ 0.21
SMG5-204ENST00000476954 JAK2O60674 1132 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms