RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 RPS6KC1Q96S38 1066 aa12.65□□□□□ -0.38
XPC-205ENST00000476581 CCDC134Q9H6E4 229 aa12.65□□□□□ -0.38
XPC-205ENST00000476581 ECT2Q9H8V3 914 aa12.65□□□□□ -0.38
XPC-205ENST00000476581 PRDM5Q9NQX1 630 aaPredicted RBP12.65□□□□□ -0.38
XPC-205ENST00000476581 ARHGEF3Q9NR81 526 aa12.65□□□□□ -0.38
XPC-205ENST00000476581 ABCF3Q9NUQ8 709 aa12.65□□□□□ -0.38
XPC-205ENST00000476581 FAM49BQ9NUQ9 324 aa12.65□□□□□ -0.38
XPC-205ENST00000476581 CES2O00748 559 aa12.65□□□□□ -0.39
XPC-205ENST00000476581 TLR3O15455 904 aaKnown RBP12.65□□□□□ -0.39
XPC-205ENST00000476581 CHN1P15882 459 aa12.65□□□□□ -0.39
XPC-205ENST00000476581 EIF3BP55884 814 aaKnown RBP12.65□□□□□ -0.39
XPC-205ENST00000476581 KCTD19Q17RG1 926 aaPredicted RBP12.65□□□□□ -0.39
XPC-205ENST00000476581 CLEC16AQ2KHT3 1053 aa12.65□□□□□ -0.39
XPC-205ENST00000476581 ARMC3Q5W041 872 aa12.65□□□□□ -0.39
XPC-205ENST00000476581 LRRC34Q8IZ02 419 aa12.65□□□□□ -0.39
XPC-205ENST00000476581 CRIPAKQ8N1N5 446 aa12.65□□□□□ -0.39
XPC-205ENST00000476581 NEUROG2Q9H2A3 272 aa12.65□□□□□ -0.39
XPC-205ENST00000476581 TMEM39AQ9NV64 488 aa12.65□□□□□ -0.39
XPC-205ENST00000476581 WDR35Q9P2L0 1181 aa12.65□□□□□ -0.39
XPC-205ENST00000476581 SQORQ9Y6N5 450 aa12.65□□□□□ -0.39
XPC-205ENST00000476581 PRUNE2Q8WUY3 3088 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 PODXLO00592 558 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 FTCDO95954 541 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 RPLP2P05387 115 aaKnown RBP12.64□□□□□ -0.39
XPC-205ENST00000476581 KRT16P08779 473 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 CD19P15391 556 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 ALDH3A1P30838 453 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 MSH2P43246 934 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 DNA2P51530 1060 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 PSMC1P62191 440 aaKnown RBP12.64□□□□□ -0.39
XPC-205ENST00000476581 FAM189BP81408 668 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 ATP11AP98196 1134 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 PPP1R15BQ5SWA1 713 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 NUGGCQ68CJ6 796 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 GBP7Q8N8V2 638 aaPredicted RBP12.64□□□□□ -0.39
XPC-205ENST00000476581 UBA3Q8TBC4 463 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 FAM81AQ8TBF8 368 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 ELAC2Q9BQ52 826 aaKnown RBP12.64□□□□□ -0.39
XPC-205ENST00000476581 RAB17Q9H0T7 212 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 DAAM1Q9Y4D1 1078 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 A8MUI8 341 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 PPFIA2O75334 1257 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 PALMO75781 387 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 CYP1A1P04798 512 aaPredicted RBP12.64□□□□□ -0.39
XPC-205ENST00000476581 ACRP10323 421 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 CSF2RAP15509 400 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 LRPAP1P30533 357 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 NOMO3P69849 1222 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 INCA1Q0VD86 236 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 TIGD5Q53EQ6 642 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 WSCD1Q658N2 575 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 TMC3Q7Z5M5 1100 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 LMNTD2Q8IXW0 634 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 LRRC52Q8N7C0 313 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 SLC35G2Q8TBE7 412 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 TAF4BQ92750 862 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 KLHL29Q96CT2 875 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 TMEM176AQ96HP8 235 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 PBKQ96KB5 322 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 NSRP1Q9H0G5 558 aaKnown RBP12.64□□□□□ -0.39
XPC-205ENST00000476581 FNDC1Q4ZHG4 1894 aaPredicted RBP12.64□□□□□ -0.39
XPC-205ENST00000476581 COL4A6Q14031 1691 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 TSC2P49815 1807 aa12.64□□□□□ -0.39
XPC-205ENST00000476581 UPP2O95045 317 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 H2AFZP0C0S5 128 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 MMP13P45452 471 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 COPS2P61201 443 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 BNIP1Q12981 228 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 SPDYCQ5MJ68 293 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 H2AFVQ71UI9 128 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 SDCCAG8Q86SQ7 713 aaPredicted RBP12.63□□□□□ -0.39
XPC-205ENST00000476581 OR6B3Q8NGW1 331 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 TOX2Q96NM4 488 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 BARX2Q9UMQ3 279 aaPredicted RBP12.63□□□□□ -0.39
XPC-205ENST00000476581 PTPRSQ13332 1948 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 STAU1O95793 577 aaKnown RBP12.63□□□□□ -0.39
XPC-205ENST00000476581 CLTBP09497 229 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 CCDC130P13994 396 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 FLT3P36888 993 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 TAF6P49848 677 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 BCAR1P56945 870 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 CUL3Q13618 768 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 PKN2Q16513 984 aaKnown RBP12.63□□□□□ -0.39
XPC-205ENST00000476581 PPP1R26Q5T8A7 1209 aaPredicted RBP12.63□□□□□ -0.39
XPC-205ENST00000476581 CYP4A22Q5TCH4 519 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 VPS36Q86VN1 386 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 TMEM173Q86WV6 379 aaPredicted RBP12.63□□□□□ -0.39
XPC-205ENST00000476581 DDX42Q86XP3 938 aaKnown RBP eCLIP12.63□□□□□ -0.39
XPC-205ENST00000476581 RBM41Q96IZ5 413 aaKnown RBP12.63□□□□□ -0.39
XPC-205ENST00000476581 B3GALT6Q96L58 329 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 HEXIM2Q96MH2 286 aaKnown RBP12.63□□□□□ -0.39
XPC-205ENST00000476581 C11orf70Q9BRQ4 267 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 TBC1D13Q9NVG8 400 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 VWA8A3KMH1 1905 aa12.63□□□□□ -0.39
XPC-205ENST00000476581 E7ENQ6 273 aa12.62□□□□□ -0.39
XPC-205ENST00000476581 PDLIM1O00151 329 aa12.62□□□□□ -0.39
XPC-205ENST00000476581 CYB561D2O14569 222 aa12.62□□□□□ -0.39
XPC-205ENST00000476581 B3GAT3O94766 335 aa12.62□□□□□ -0.39
XPC-205ENST00000476581 PFKMP08237 780 aa12.62□□□□□ -0.39
XPC-205ENST00000476581 GNAZP19086 355 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms