RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 MBL2P11226 248 aaPredicted RBP17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 NOP14P78316 857 aaKnown RBP17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 CYP27A1Q02318 531 aa17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 GRIN1Q05586 938 aa17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 TAF10Q12962 218 aa17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 TRMT11Q7Z4G4 463 aaKnown RBP17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 DDX42Q86XP3 938 aaKnown RBP eCLIP17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 MIB1Q86YT6 1006 aa17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 NAT16Q8N8M0 369 aa17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 TRIML1Q8N9V2 468 aa17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 RASSF8Q8NHQ8 419 aa17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 KCNV2Q8TDN2 545 aa17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 PCED1BQ96HM7 432 aa17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 HSPA12BQ96MM6 686 aa17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 EXOC7Q9UPT5 735 aa17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 PCDHB9Q9Y5E1 797 aa17.54■□□□□ 0.4
APOBEC3F-203ENST00000476513 IGSF10Q6WRI0 2623 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 ACACAQ13085 2346 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 A0A1W2PQF6 199 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 E2F8A0AVK6 867 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 F8VP50 259 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 TRIM66O15016 1216 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 TULP3O75386 442 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 LDHAP00338 332 aaKnown RBP17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 TMEM191BP0C7N4 346 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 HOXB2P14652 356 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 WASP42768 502 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 GAD2Q05329 585 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 C10orf76Q5T2E6 689 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 L1TD1Q5T7N2 865 aaKnown RBP17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 BTBD8Q5XKL5 378 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 DYMQ7RTS9 669 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 NAXDQ8IW45 347 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 HPDLQ96IR7 371 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 C8orf48Q96LL4 319 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 ACCSQ96QU6 501 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 CYP8B1Q9UNU6 501 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 FREM2Q5SZK8 3169 aa17.53■□□□□ 0.4
APOBEC3F-203ENST00000476513 LAMA5O15230 3695 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 NBEAQ8NFP9 2946 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 HOXC11O43248 304 aaPredicted RBP17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 ZNF217O75362 1048 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 GARTP22102 1010 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 WARSP23381 471 aaKnown RBP17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 NTSR1P30989 418 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 DDIT3P35638 169 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 MYO1EQ12965 1108 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 PLEKHG6Q3KR16 790 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 TDRD10Q5VZ19 366 aaKnown RBP17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 TERB1Q8NA31 727 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 MYCBPAPQ8TBZ2 947 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 MDM1Q8TC05 714 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 HNRNPLLQ8WVV9 542 aaKnown RBP17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 OTUB2Q96DC9 234 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 ZNF419Q96HQ0 510 aaPredicted RBP17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 ZFRQ96KR1 1074 aaKnown RBP17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 BBC3Q96PG8 261 aaPredicted RBP17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 CBWD1Q9BRT8 395 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 MRPL44Q9H9J2 332 aaKnown RBP17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 CD248Q9HCU0 757 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 TMEM30AQ9NV96 361 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 TBC1D7Q9P0N9 293 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 DEC1Q9P2X7 70 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 RAXQ9Y2V3 346 aa17.52■□□□□ 0.4
APOBEC3F-203ENST00000476513 GCN1Q92616 2671 aaKnown RBP17.52■□□□□ 0.39
APOBEC3F-203ENST00000476513 MYO18AQ92614 2054 aaKnown RBP17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 MYOFQ9NZM1 2061 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 TRIM24O15164 1050 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 NDUFV2P19404 249 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 LONP1P36776 959 aaKnown RBP17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 CACNA2D1P54289 1103 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 PREPLQ4J6C6 727 aaPredicted RBP17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 MDH1BQ5I0G3 518 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 RGL4Q8IZJ4 473 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 OR5B17Q8NGF7 314 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 NOC3LQ8WTT2 800 aaKnown RBP17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 ERLEC1Q96DZ1 483 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 ANKRD36BP1Q96IX9 119 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 SLITRK1Q96PX8 696 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 ACOX2Q99424 681 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 FAM124BQ9H5Z6 455 aaPredicted RBP17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 INTS13Q9NVM9 706 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 SEL1LQ9UBV2 794 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 APOBEC2Q9Y235 224 aaKnown RBP17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 STARD13Q9Y3M8 1113 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 R3HCC1Q9Y3T6 440 aaKnown RBP17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 KIF3AQ9Y496 699 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 NME7Q9Y5B8 376 aa17.51■□□□□ 0.39
APOBEC3F-203ENST00000476513 PTPRJQ12913 1337 aa17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 ZBTB24O43167 697 aaPredicted RBP17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 COCHO43405 550 aa17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 IFRD2Q12894 506 aaPredicted RBP17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 EGFLAMQ63HQ2 1017 aa17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 TOGARAM2Q6ZUX3 1019 aa17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 HS2ST1Q7LGA3 356 aa17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 SLCO6A1Q86UG4 719 aa17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 TMEM25Q86YD3 366 aa17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 BBS7Q8IWZ6 715 aa17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 IPO4Q8TEX9 1081 aaKnown RBP17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 COL26A1Q96A83 441 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms