RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 KIAA1958Q8N8K9 716 aa15.24■□□□□ 0.03
ABCF3-211ENST00000475728 ARL14EPQ8N8R7 260 aaPredicted RBP15.24■□□□□ 0.03
ABCF3-211ENST00000475728 TAB2Q9NYJ8 693 aa15.24■□□□□ 0.03
ABCF3-211ENST00000475728 GMIPQ9P107 970 aa15.24■□□□□ 0.03
ABCF3-211ENST00000475728 MRPS17Q9Y2R5 130 aaKnown RBP15.24■□□□□ 0.03
ABCF3-211ENST00000475728 MAN2B1O00754 1011 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 OLFM2O95897 454 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 OAS1P00973 400 aaKnown RBP15.23■□□□□ 0.03
ABCF3-211ENST00000475728 ZDHHC11BP0C7U3 371 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 NUBP1P53384 320 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 MLLT6P55198 1093 aaPredicted RBP15.23■□□□□ 0.03
ABCF3-211ENST00000475728 STARD6P59095 220 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 MEA1Q16626 185 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 ASTLQ6HA08 431 aaPredicted RBP15.23■□□□□ 0.03
ABCF3-211ENST00000475728 CCDC186Q7Z3E2 898 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 TTC30AQ86WT1 665 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 GPIHBP1Q8IV16 184 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 FLCNQ8NFG4 579 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 SHC3Q92529 594 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 RSPRY1Q96DX4 576 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 CDK5RAP1Q96SZ6 601 aaKnown RBP15.23■□□□□ 0.03
ABCF3-211ENST00000475728 NELL2Q99435 816 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 NACA2Q9H009 215 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 SMG9Q9H0W8 520 aaKnown RBP15.23■□□□□ 0.03
ABCF3-211ENST00000475728 C8orf33Q9H7E9 229 aaPredicted RBP15.23■□□□□ 0.03
ABCF3-211ENST00000475728 LRRC4Q9HBW1 653 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 LIMA1Q9UHB6 759 aaKnown RBP15.23■□□□□ 0.03
ABCF3-211ENST00000475728 CHORDC1Q9UHD1 332 aaPredicted RBP15.23■□□□□ 0.03
ABCF3-211ENST00000475728 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.23■□□□□ 0.03
ABCF3-211ENST00000475728 DAAM1Q9Y4D1 1078 aa15.23■□□□□ 0.03
ABCF3-211ENST00000475728 KRBA1A5PL33 1030 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 RNF225M0QZC1 329 aaPredicted RBP15.22■□□□□ 0.03
ABCF3-211ENST00000475728 CAVIN2O95810 425 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 BRD2P25440 801 aaKnown RBP15.22■□□□□ 0.03
ABCF3-211ENST00000475728 USP8P40818 1118 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 PLA2G4AP47712 749 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 PDE4CQ08493 712 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 USP4Q13107 963 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 MTF1Q14872 753 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 PDGFRLQ15198 375 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 ARHGAP44Q17R89 818 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 GPRIN1Q7Z2K8 1008 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 PIGZQ86VD9 579 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 AOPEPQ8N6M6 819 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 SH3RF2Q8TEC5 729 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 CYP2S1Q96SQ9 504 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 PRRX2Q99811 253 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 KCNH6Q9H252 994 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 VPS16Q9H269 839 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 TBC1D17Q9HA65 648 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 DNAJC12Q9UKB3 198 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 CCL26Q9Y258 94 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 USP3Q9Y6I4 520 aa15.22■□□□□ 0.03
ABCF3-211ENST00000475728 BECN2A8MW95 431 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 M0QYV0 167 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 SLC9A3R1O14745 358 aaPredicted RBP15.21■□□□□ 0.03
ABCF3-211ENST00000475728 TLR5O60602 858 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 PDGFBP01127 241 aaPredicted RBP15.21■□□□□ 0.03
ABCF3-211ENST00000475728 MBL2P11226 248 aaPredicted RBP15.21■□□□□ 0.03
ABCF3-211ENST00000475728 RALAP11233 206 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 AOC1P19801 751 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 ZNF165P49910 485 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 KPNA1P52294 538 aaPredicted RBP15.21■□□□□ 0.03
ABCF3-211ENST00000475728 COPB1P53618 953 aaKnown RBP15.21■□□□□ 0.03
ABCF3-211ENST00000475728 BPIFB4P59827 614 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 AMPD2Q01433 879 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 PTK2Q05397 1052 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 GOLGA8FQ08AF8 430 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 GOLGA8DPQ0D2H9 430 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 ZNF77Q15935 545 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 RAB41Q5JT25 222 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 ZNF852Q6ZMS4 543 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 SIX6OS1Q8N1H7 587 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 ZNF276Q8N554 614 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 UBA3Q8TBC4 463 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 KCTD13Q8WZ19 329 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 TFAP2BQ92481 460 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 EXOC4Q96A65 974 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 LRRC3BQ96PB8 259 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 SLC22A12Q96S37 553 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 OSBPL6Q9BZF3 934 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 SIX2Q9NPC8 291 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 PLCB1Q9NQ66 1216 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 CYLDQ9NQC7 956 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 GKN1Q9NS71 199 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 CLIC5Q9NZA1 410 aa15.21■□□□□ 0.03
ABCF3-211ENST00000475728 NUP210Q8TEM1 1887 aaPredicted RBP15.2■□□□□ 0.02
ABCF3-211ENST00000475728 ZDBF2Q9HCK1 2354 aa15.2■□□□□ 0.02
ABCF3-211ENST00000475728 KANSL1LA0AUZ9 987 aa15.2■□□□□ 0.02
ABCF3-211ENST00000475728 SYCE3A1L190 88 aa15.2■□□□□ 0.02
ABCF3-211ENST00000475728 LRRC10BA6NIK2 292 aa15.2■□□□□ 0.02
ABCF3-211ENST00000475728 LGALS16A8MUM7 142 aa15.2■□□□□ 0.02
ABCF3-211ENST00000475728 LEFTY2O00292 366 aa15.2■□□□□ 0.02
ABCF3-211ENST00000475728 ARNTLO00327 626 aa15.2■□□□□ 0.02
ABCF3-211ENST00000475728 NCAM2O15394 837 aa15.2■□□□□ 0.02
ABCF3-211ENST00000475728 CYP26A1O43174 497 aa15.2■□□□□ 0.02
ABCF3-211ENST00000475728 COCHO43405 550 aa15.2■□□□□ 0.02
ABCF3-211ENST00000475728 THAP12O43422 761 aa15.2■□□□□ 0.02
ABCF3-211ENST00000475728 ZBED1O96006 694 aa15.2■□□□□ 0.02
ABCF3-211ENST00000475728 ZNF18P17022 549 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms