RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PRR25Q96S07 402 aa7.69□□□□□ -1.18
SMC5-203ENST00000475540 VN1R3Q9BXE9 311 aa7.69□□□□□ -1.18
SMC5-203ENST00000475540 SERGEFQ9UGK8 458 aa7.69□□□□□ -1.18
SMC5-203ENST00000475540 AMFRQ9UKV5 643 aa7.69□□□□□ -1.18
SMC5-203ENST00000475540 MANSC4A6NHS7 340 aaPredicted RBP7.68□□□□□ -1.18
SMC5-203ENST00000475540 CES2O00748 559 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 THAP12O43422 761 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 PMPCBO75439 489 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 PDE8BO95263 885 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 PARP1P09874 1014 aaKnown RBP7.68□□□□□ -1.18
SMC5-203ENST00000475540 HGFP14210 728 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 TRIM27P14373 513 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 ZNF37AP17032 561 aaPredicted RBP7.68□□□□□ -1.18
SMC5-203ENST00000475540 GKP32189 559 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 PGDP52209 483 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 TIRAPP58753 221 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 CYP1B1Q16678 543 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 TMEM119Q4V9L6 283 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 DPY19L3Q6ZPD9 716 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 IQCDQ96DY2 449 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 TFCP2L1Q9NZI6 479 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 CAPN11Q9UMQ6 739 aa7.68□□□□□ -1.18
SMC5-203ENST00000475540 SMIM22K7EJ46 135 aa7.67□□□□□ -1.18
SMC5-203ENST00000475540 EXOC3O60645 756 aa7.67□□□□□ -1.18
SMC5-203ENST00000475540 TIAL1Q01085 375 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMC5-203ENST00000475540 MZT2AQ6P582 158 aa7.67□□□□□ -1.18
SMC5-203ENST00000475540 TRIM72Q6ZMU5 477 aa7.67□□□□□ -1.18
SMC5-203ENST00000475540 DAZAP1Q96EP5 407 aaKnown RBP7.67□□□□□ -1.18
SMC5-203ENST00000475540 THAP7Q9BT49 309 aaPredicted RBP7.67□□□□□ -1.18
SMC5-203ENST00000475540 M0R3H8 397 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 CAND2O75155 1236 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 CD19P15391 556 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 PHKG2P15735 406 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 HTRA4P83105 476 aaPredicted RBP7.66□□□□□ -1.18
SMC5-203ENST00000475540 TFF2Q03403 129 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 ZNF543Q08ER8 600 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 GRM1Q13255 1194 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 IFIT5Q13325 482 aaKnown RBP7.66□□□□□ -1.18
SMC5-203ENST00000475540 DENND2CQ68D51 928 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 KSR2Q6VAB6 950 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 TERB1Q8NA31 727 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 ATP11CQ8NB49 1132 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 PJA1Q8NG27 643 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 CYP2W1Q8TAV3 490 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 MACROD1Q9BQ69 325 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 ZCWPW1Q9H0M4 648 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 TRIM36Q9NQ86 728 aa7.66□□□□□ -1.18
SMC5-203ENST00000475540 NKX1-2Q9UD57 310 aaPredicted RBP7.66□□□□□ -1.18
SMC5-203ENST00000475540 ARHGEF17Q96PE2 2063 aaPredicted RBP7.66□□□□□ -1.18
SMC5-203ENST00000475540 EXOC5O00471 708 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 APAF1O14727 1248 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 KPNA5O15131 536 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 SNX2O60749 519 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 FGAP02671 866 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 A1BGP04217 495 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 GNALP38405 381 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 SLC10A2Q12908 348 aaPredicted RBP7.65□□□□□ -1.18
SMC5-203ENST00000475540 KCNAB1Q14722 419 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 PROSER3Q2NL68 480 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 PRAMEF17Q5VTA0 474 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 KIAA1614Q5VZ46 1190 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 C11orf96Q7Z7L8 435 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 SFTPA1Q8IWL2 248 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 HIST1H2AAQ96QV6 131 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 TBCBQ99426 244 aa7.65□□□□□ -1.18
SMC5-203ENST00000475540 POM121BA6NF01 834 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 LINC01548A6NM66 108 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 SLC5A1P13866 664 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 CREB1P16220 341 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 TUBA4AP68366 448 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 SRSF4Q08170 494 aaKnown RBP7.64□□□□□ -1.19
SMC5-203ENST00000475540 COLEC12Q5KU26 742 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 PTCHD4Q6ZW05 846 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 CCDC33Q8N5R6 958 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 DPF1Q92782 380 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 SNX18Q96RF0 628 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 PCGF6Q9BYE7 350 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 CIPCQ9C0C6 399 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 MGAT4CQ9UBM8 478 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 DNAJB11Q9UBS4 358 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 FRMD4BQ9Y2L6 1034 aa7.64□□□□□ -1.19
SMC5-203ENST00000475540 H7C1Q1 480 aa7.63□□□□□ -1.19
SMC5-203ENST00000475540 AREL1O15033 823 aa7.63□□□□□ -1.19
SMC5-203ENST00000475540 PMM2O15305 246 aa7.63□□□□□ -1.19
SMC5-203ENST00000475540 KRT18P05783 430 aaKnown RBP7.63□□□□□ -1.19
SMC5-203ENST00000475540 CASP5P51878 434 aa7.63□□□□□ -1.19
SMC5-203ENST00000475540 MANEALQ5VSG8 457 aa7.63□□□□□ -1.19
SMC5-203ENST00000475540 RRAGBQ5VZM2 374 aa7.63□□□□□ -1.19
SMC5-203ENST00000475540 SERPINA13PQ6UXR4 307 aa7.63□□□□□ -1.19
SMC5-203ENST00000475540 NGDNQ8NEJ9 315 aaKnown RBP7.63□□□□□ -1.19
SMC5-203ENST00000475540 VOPP1Q96AW1 172 aa7.63□□□□□ -1.19
SMC5-203ENST00000475540 CTHRC1Q96CG8 243 aa7.63□□□□□ -1.19
SMC5-203ENST00000475540 HEYLQ9NQ87 328 aaPredicted RBP7.63□□□□□ -1.19
SMC5-203ENST00000475540 SNX15Q9NRS6 342 aa7.63□□□□□ -1.19
SMC5-203ENST00000475540 HPSEQ9Y251 543 aa7.63□□□□□ -1.19
SMC5-203ENST00000475540 NBPF7P0C2Y1 421 aaPredicted RBP7.62□□□□□ -1.19
SMC5-203ENST00000475540 FPR3P25089 353 aa7.62□□□□□ -1.19
SMC5-203ENST00000475540 STT3AP46977 705 aa7.62□□□□□ -1.19
SMC5-203ENST00000475540 PRIM2P49643 509 aa7.62□□□□□ -1.19
SMC5-203ENST00000475540 RNASE12Q5GAN4 147 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms