RNA–Protein interactions for RNA: ENST00000475346.1

RPSA-205, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-205ENST00000475346 ZMAT2Q96NC0 199 aaKnown RBP5.79□□□□□ -1.48
RPSA-205ENST00000475346 CARD11Q9BXL7 1154 aa5.79□□□□□ -1.48
RPSA-205ENST00000475346 TLR10Q9BXR5 811 aa5.79□□□□□ -1.48
RPSA-205ENST00000475346 ENKD1Q9H0I2 346 aa5.79□□□□□ -1.48
RPSA-205ENST00000475346 PRDM13Q9H4Q3 707 aa5.79□□□□□ -1.48
RPSA-205ENST00000475346 L2HGDHQ9H9P8 463 aa5.79□□□□□ -1.48
RPSA-205ENST00000475346 MRGBPQ9NV56 204 aa5.79□□□□□ -1.48
RPSA-205ENST00000475346 SHOC2Q9UQ13 582 aa5.79□□□□□ -1.48
RPSA-205ENST00000475346 CAMK2AQ9UQM7 478 aa5.79□□□□□ -1.48
RPSA-205ENST00000475346 CDYLQ9Y232 598 aa5.79□□□□□ -1.48
RPSA-205ENST00000475346 PCDHA5Q9Y5H7 936 aa5.79□□□□□ -1.48
RPSA-205ENST00000475346 EIF4G3O43432 1585 aaKnown RBP5.79□□□□□ -1.48
RPSA-205ENST00000475346 CHD1O14646 1710 aa5.79□□□□□ -1.48
RPSA-205ENST00000475346 TDRD9Q8NDG6 1382 aaKnown RBP5.79□□□□□ -1.48
RPSA-205ENST00000475346 TOPBP1Q92547 1522 aa5.79□□□□□ -1.48
RPSA-205ENST00000475346 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 TSPAN3O60637 253 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 TAF5LO75529 589 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 ITGB1P05556 798 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 GLULP15104 373 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 MAPK4P31152 587 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 HOXD13P35453 343 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 PAFAH1B1P43034 410 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 LIMS1P48059 325 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 CDR1P51861 262 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 PRKAG1P54619 331 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 ADAM8P78325 824 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 RPP30P78346 268 aaKnown RBP5.78□□□□□ -1.48
RPSA-205ENST00000475346 SATB1Q01826 763 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 MRPL49Q13405 166 aaKnown RBP5.78□□□□□ -1.48
RPSA-205ENST00000475346 TDGQ13569 410 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 UBXN2BQ14CS0 331 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 TBCEQ15813 527 aaPredicted RBP5.78□□□□□ -1.48
RPSA-205ENST00000475346 FAM214AQ32MH5 1076 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 TRIM60Q495X7 471 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 SNX30Q5VWJ9 437 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 LAYNQ6UX15 382 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 SLC30A10Q6XR72 485 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 USP30Q70CQ3 517 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 TTC30AQ86WT1 665 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 TMEFF1Q8IYR6 380 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 LINC00482Q8N8I6 264 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 DNAJB14Q8TBM8 379 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 FAM227BQ96M60 508 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 GPHA2Q96T91 129 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 PDCL3Q9H2J4 239 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 EPB41L4BQ9H329 900 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 RMI1Q9H9A7 625 aa5.78□□□□□ -1.48
RPSA-205ENST00000475346 EIF2B3Q9NR50 452 aaKnown RBP5.78□□□□□ -1.48
RPSA-205ENST00000475346 CCDC88BA6NC98 1476 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 OR2W5A6NFC9 320 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 B5MCH6 92 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 H3BNC9 293 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 HRKO00198 91 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 KIAA0355O15063 1070 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 STC2O76061 302 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 TFRCP02786 760 aaKnown RBP5.77□□□□□ -1.49
RPSA-205ENST00000475346 ACADMP11310 421 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 ZNF28P17035 718 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 NTSR1P30989 418 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 MESP2Q0VG99 397 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 SF3A3Q12874 501 aaKnown RBP eCLIP5.77□□□□□ -1.49
RPSA-205ENST00000475346 BAK1Q16611 211 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 TBR1Q16650 682 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 PTCHD3Q3KNS1 767 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 ATXN7L2Q5T6C5 722 aaPredicted RBP5.77□□□□□ -1.49
RPSA-205ENST00000475346 FAM69AQ5T7M9 428 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 ATF7IPQ6VMQ6 1270 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 Q6ZUG5 572 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 H1FNTQ75WM6 255 aaPredicted RBP5.77□□□□□ -1.49
RPSA-205ENST00000475346 REXO1L1PQ8IX06 675 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 GALNT4Q8N4A0 578 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 USP38Q8NB14 1042 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 RNF169Q8NCN4 708 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 NSUN7Q8NE18 718 aaKnown RBP5.77□□□□□ -1.49
RPSA-205ENST00000475346 CXorf38Q8TB03 319 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 KCNN1Q92952 543 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 PPP2R3CQ969Q6 453 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 RBM17Q96I25 401 aaKnown RBP5.77□□□□□ -1.49
RPSA-205ENST00000475346 APOPT1Q96IL0 206 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 PHACTR3Q96KR7 559 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 SMOQ99835 787 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 SLF1Q9BQI6 1058 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 ZNF552Q9H707 407 aaPredicted RBP5.77□□□□□ -1.49
RPSA-205ENST00000475346 ZCCHC17Q9NP64 241 aaKnown RBP5.77□□□□□ -1.49
RPSA-205ENST00000475346 IL23AQ9NPF7 189 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 PLSCR4Q9NRQ2 329 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 ETAA1Q9NY74 926 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 DNAJB11Q9UBS4 358 aa5.77□□□□□ -1.49
RPSA-205ENST00000475346 MRPS17Q9Y2R5 130 aaKnown RBP5.77□□□□□ -1.49
RPSA-205ENST00000475346 TOP2AP11388 1531 aaKnown RBP5.77□□□□□ -1.49
RPSA-205ENST00000475346 hCG_1807616A0A1W2PRN6 198 aa5.76□□□□□ -1.49
RPSA-205ENST00000475346 CCDC78A2IDD5 438 aa5.76□□□□□ -1.49
RPSA-205ENST00000475346 FAM90A20PA6NIJ5 464 aa5.76□□□□□ -1.49
RPSA-205ENST00000475346 ANP32CO43423 234 aa5.76□□□□□ -1.49
RPSA-205ENST00000475346 SGPL1O95470 568 aa5.76□□□□□ -1.49
RPSA-205ENST00000475346 CER1O95813 267 aa5.76□□□□□ -1.49
RPSA-205ENST00000475346 SCGB1D1O95968 90 aa5.76□□□□□ -1.49
RPSA-205ENST00000475346 ATXN1LP0C7T5 689 aaKnown RBP5.76□□□□□ -1.49
RPSA-205ENST00000475346 HSPA1AP0DMV8 641 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms