RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 KRTAP10-11P60412 298 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 STK3Q13188 491 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 CNGA2Q16280 664 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 RNF220Q5VTB9 566 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 TCEAL8Q8IYN2 117 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 FAM156AQ8NDB6 213 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 TRIM43Q96BQ3 446 aaPredicted RBP5.6□□□□□ -1.51
LTN1-204ENST00000475344 CCDC17Q96LX7 622 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 DNMT3BQ9UBC3 853 aaKnown RBP5.6□□□□□ -1.51
LTN1-204ENST00000475344 ITGB1BP2Q9UKP3 347 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 BTBD3Q9Y2F9 522 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 PAXBP1Q9Y5B6 917 aa5.6□□□□□ -1.51
LTN1-204ENST00000475344 ZNF521Q96K83 1311 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 PIAS2O75928 621 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 HGFP14210 728 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 EPHA3P29320 983 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 UQCRC1P31930 480 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 CACNB3P54284 484 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 SLC29A2Q14542 456 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 ZNF268Q14587 947 aaPredicted RBP5.59□□□□□ -1.51
LTN1-204ENST00000475344 FAM187BQ17R55 369 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 KIAA0753Q2KHM9 967 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 BCDIN3DQ7Z5W3 292 aaKnown RBP5.59□□□□□ -1.51
LTN1-204ENST00000475344 RAB11FIP4Q86YS3 637 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 GALNT16Q8N428 558 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 LRTOMTQ8WZ04 291 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 RSPRY1Q96DX4 576 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 EFHD1Q9BUP0 239 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 ZNF287Q9HBT7 754 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 XPNPEP3Q9NQH7 507 aa5.59□□□□□ -1.51
LTN1-204ENST00000475344 VSTM5A8MXK1 200 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 ISM1B1AKI9 464 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 TMEM232C9JQI7 657 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 ADAMTS3O15072 1205 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 CD3EAPO15446 510 aaKnown RBP5.58□□□□□ -1.52
LTN1-204ENST00000475344 CCP110O43303 1012 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 RRP9O43818 475 aaKnown RBP5.58□□□□□ -1.52
LTN1-204ENST00000475344 CHRM5P08912 532 aaPredicted RBP5.58□□□□□ -1.52
LTN1-204ENST00000475344 CREB1P16220 341 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 SFPQP23246 707 aaKnown RBP eCLIP5.58□□□□□ -1.52
LTN1-204ENST00000475344 YY1P25490 414 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 PGDP52209 483 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 LMAN2Q12907 356 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 ARHGEF7Q14155 803 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 AWAT1Q58HT5 328 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 NXNQ6DKJ4 435 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 C11orf87Q6NUJ2 197 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 PTCHD4Q6ZW05 846 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 SFTPA1Q8IWL2 248 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 MYO1HQ8N1T3 1032 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 ADAMTS18Q8TE60 1221 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 SMCR8Q8TEV9 937 aaPredicted RBP5.58□□□□□ -1.52
LTN1-204ENST00000475344 NMD3Q96D46 503 aaKnown RBP5.58□□□□□ -1.52
LTN1-204ENST00000475344 FYTTD1Q96QD9 318 aaKnown RBP5.58□□□□□ -1.52
LTN1-204ENST00000475344 VN1R3Q9BXE9 311 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 LRRC27Q9C0I9 530 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 PRSS22Q9GZN4 317 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 SPRTNQ9H040 489 aaPredicted RBP5.58□□□□□ -1.52
LTN1-204ENST00000475344 ASIC5Q9NY37 505 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 MID2Q9UJV3 735 aa5.58□□□□□ -1.52
LTN1-204ENST00000475344 TCRBV5S1A1TA0A578 114 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 MGEA5O60502 916 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 TPH1P17752 444 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 IL1R2P27930 398 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 PTGER1P34995 402 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 FMO1Q01740 532 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 RABEP1Q15276 862 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 DENND2CQ68D51 928 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 DARS2Q6PI48 645 aaKnown RBP5.57□□□□□ -1.52
LTN1-204ENST00000475344 TMEM65Q6PI78 240 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 ZNF366Q8N895 744 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 C11orf44Q8N8P7 122 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 PRSS3P2Q8NHM4 247 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 HS6ST2Q96MM7 605 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 TRIM5Q9C035 493 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 VPS16Q9H269 839 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 SNX15Q9NRS6 342 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 MGAT4CQ9UBM8 478 aa5.57□□□□□ -1.52
LTN1-204ENST00000475344 EXOC5O00471 708 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 TPP1O14773 563 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 DSCR3O14972 297 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 FRS3O43559 492 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 TSPAN6O43657 245 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 BMP15O95972 392 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 MYF5P13349 255 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 ACVR2AP27037 513 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 DIO1P49895 249 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 CPT1AP50416 773 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 GATMP50440 423 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 TIRAPP58753 221 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 GRM3Q14832 879 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 POLD3Q15054 466 aaPredicted RBP5.56□□□□□ -1.52
LTN1-204ENST00000475344 Q4G0T1 1027 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 SESTD1Q86VW0 696 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 YAF2Q8IY57 180 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 TSR2Q969E8 191 aaKnown RBP5.56□□□□□ -1.52
LTN1-204ENST00000475344 FCRL4Q96PJ5 515 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 FAM118BQ9BPY3 351 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 TRNAU1APQ9NX07 287 aaKnown RBP5.56□□□□□ -1.52
LTN1-204ENST00000475344 ELOVL5Q9NYP7 299 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms