RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PGLYRP2Q96PD5 576 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 SLC12A8A0AV02 714 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 CBX4O00257 560 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 COPAP53621 1224 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 NCKAP1LP55160 1127 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 PLCL1Q15111 1095 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 MPZL3Q6UWV2 235 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 MRPS31Q92665 395 aaKnown RBP11.33□□□□□ -0.6
VAPB-204ENST00000475243 VIPAS39Q9H9C1 493 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 HAO1Q9UJM8 370 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 EIF3LQ9Y262 564 aaKnown RBP11.33□□□□□ -0.6
VAPB-204ENST00000475243 AAR2Q9Y312 384 aaKnown RBP11.33□□□□□ -0.6
VAPB-204ENST00000475243 AKAP5P24588 427 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 BACE1P56817 501 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 OTUD4Q01804 1114 aaKnown RBP11.33□□□□□ -0.6
VAPB-204ENST00000475243 PTAR1Q7Z6K3 402 aaPredicted RBP11.33□□□□□ -0.6
VAPB-204ENST00000475243 TRIM69Q86WT6 500 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 OSGEPQ9NPF4 335 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 SNTG2Q9NY99 539 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 VPS28Q9UK41 221 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 VPS26AO75436 327 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 SUPT20HL2P0C7V6 817 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 SLC2A3P11169 496 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 FGFR1P11362 822 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 MICU2Q8IYU8 434 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 KRT78Q8N1N4 520 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 RIBC1Q8N443 379 aaPredicted RBP11.33□□□□□ -0.6
VAPB-204ENST00000475243 DPF3Q92784 378 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 GPRASP2Q96D09 838 aa11.33□□□□□ -0.6
VAPB-204ENST00000475243 H7C4K7 107 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 MUTP22033 750 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 TFAP2DQ7Z6R9 452 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 A0A087WZ62 844 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 P4HA2O15460 535 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 PSTPIP1O43586 416 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 POU1F1P28069 291 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 CCDC15Q0P6D6 951 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 NBPF12Q5TAG4 269 aaPredicted RBP11.32□□□□□ -0.6
VAPB-204ENST00000475243 CACHD1Q5VU97 1274 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 DAB2IPQ5VWQ8 1189 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 SRLQ86TD4 932 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 NT5DC3Q86UY8 548 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 FDXACB1Q9BRP7 624 aaPredicted RBP11.32□□□□□ -0.6
VAPB-204ENST00000475243 PXMP2Q9NR77 195 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 PADI4Q9UM07 663 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 PHTF1Q9UMS5 762 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 PLA2G6O60733 806 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 GEMP55040 296 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 MYL6P60660 151 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 PLEKHH3Q7Z736 793 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 LRRC6Q86X45 466 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 ZNF786Q8N393 782 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 NFKBIZQ9BYH8 718 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 MAN1C1Q9NR34 630 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 USP20Q9Y2K6 914 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 SNX8Q9Y5X2 465 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 CNTNAP2Q9UHC6 1331 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 SDR42E2A6NKP2 422 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 TRPC5OSA6NMA1 111 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 LRRIQ3A6PVS8 624 aaPredicted RBP11.32□□□□□ -0.6
VAPB-204ENST00000475243 USP1O94782 785 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 MT-CO1P00395 513 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 ERVK-24P63145 666 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 CNTN1Q12860 1018 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 MAPK7Q13164 816 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 STARD3Q14849 445 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 TRIP4Q15650 581 aaPredicted RBP11.32□□□□□ -0.6
VAPB-204ENST00000475243 SETD4Q9NVD3 440 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 GNG14A0A1W2PPG7 69 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 ERI2A8K979 691 aaKnown RBP11.32□□□□□ -0.6
VAPB-204ENST00000475243 PCDH8O95206 1070 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 JCHAINP01591 159 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 MYL4P12829 197 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 IRAK1P51617 712 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 RCN1Q15293 331 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 ARHGAP17Q68EM7 881 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 CENPLQ8N0S6 344 aaPredicted RBP11.32□□□□□ -0.6
VAPB-204ENST00000475243 DNAJC9Q8WXX5 260 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 OPTNQ96CV9 577 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 CLPBQ9H078 707 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 COPS7BQ9H9Q2 264 aaPredicted RBP11.32□□□□□ -0.6
VAPB-204ENST00000475243 CISHQ9NSE2 258 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 DCDC2Q9UHG0 476 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 RGL2O15211 777 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 TSPAN3O60637 253 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 SMNDC1O75940 238 aaKnown RBP eCLIP11.32□□□□□ -0.6
VAPB-204ENST00000475243 GIT2Q14161 759 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 POU6F1Q14863 301 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 SEMA4DQ92854 862 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 TADA1Q96BN2 335 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 C17orf75Q9HAS0 396 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 NFKBIL1Q9UBC1 381 aaPredicted RBP11.32□□□□□ -0.6
VAPB-204ENST00000475243 APPL1Q9UKG1 709 aa11.32□□□□□ -0.6
VAPB-204ENST00000475243 NR5A2O00482 541 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 HNRNPRO43390 633 aaKnown RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 GAS2O43903 313 aaKnown RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 RPS12P25398 132 aaKnown RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 RPS7P62081 194 aaKnown RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 TTC33Q6PID6 262 aaPredicted RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 C4orf22Q6V702 233 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms