RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 PAWRQ96IZ0 340 aaKnown RBP20.74■□□□□ 0.91
SSR1-204ENST00000474597 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.74■□□□□ 0.913e-10■□□□□ 8.6
SSR1-204ENST00000474597 ADAM28Q9UKQ2 775 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 FAN1Q9Y2M0 1017 aa20.74■□□□□ 0.91
SSR1-204ENST00000474597 PTPN7P35236 360 aa20.73■□□□□ 0.91
SSR1-204ENST00000474597 RFC2P35250 354 aa20.73■□□□□ 0.91
SSR1-204ENST00000474597 EPHB4P54760 987 aa20.73■□□□□ 0.91
SSR1-204ENST00000474597 MRPS5P82675 430 aaKnown RBP20.73■□□□□ 0.91
SSR1-204ENST00000474597 KLF1Q13351 362 aaPredicted RBP20.73■□□□□ 0.91
SSR1-204ENST00000474597 CUL1Q13616 776 aa20.73■□□□□ 0.91
SSR1-204ENST00000474597 CNKSR3Q6P9H4 555 aa20.73■□□□□ 0.91
SSR1-204ENST00000474597 C4orf50Q6ZRC1 276 aa20.73■□□□□ 0.91
SSR1-204ENST00000474597 TMEM209Q96SK2 561 aa20.73■□□□□ 0.91
SSR1-204ENST00000474597 KCNK16Q96T55 309 aa20.73■□□□□ 0.91
SSR1-204ENST00000474597 HERPUD2Q9BSE4 406 aa20.73■□□□□ 0.91
SSR1-204ENST00000474597 UBXN6Q9BZV1 441 aa20.73■□□□□ 0.91
SSR1-204ENST00000474597 FNDC1Q4ZHG4 1894 aaPredicted RBP20.73■□□□□ 0.91
SSR1-204ENST00000474597 SYN3O14994 580 aa20.72■□□□□ 0.91
SSR1-204ENST00000474597 KRT10P13645 584 aa20.72■□□□□ 0.91
SSR1-204ENST00000474597 BDNFP23560 247 aa20.72■□□□□ 0.91
SSR1-204ENST00000474597 PTPN9P43378 593 aa20.72■□□□□ 0.91
SSR1-204ENST00000474597 CARSP49589 748 aaKnown RBP20.72■□□□□ 0.91
SSR1-204ENST00000474597 BCAR1P56945 870 aa20.72■□□□□ 0.91
SSR1-204ENST00000474597 SNX1Q13596 522 aa20.72■□□□□ 0.91
SSR1-204ENST00000474597 HLTFQ14527 1009 aaKnown RBP eCLIP20.72■□□□□ 0.91
SSR1-204ENST00000474597 TTC27Q6P3X3 843 aa20.72■□□□□ 0.91
SSR1-204ENST00000474597 JAMLQ86YT9 394 aa20.72■□□□□ 0.91
SSR1-204ENST00000474597 SPATA2LQ8IUW3 424 aaPredicted RBP20.72■□□□□ 0.91
SSR1-204ENST00000474597 TRIM51Q9BSJ1 452 aa20.72■□□□□ 0.91
SSR1-204ENST00000474597 hCG_1818297A0A087WSY0 165 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 KDELR1P24390 212 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 CDKN2BP42772 138 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 ADCY1Q08828 1119 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 ANKS1BQ7Z6G8 1248 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 CEP57Q86XR8 500 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 DCP1BQ8IZD4 617 aaKnown RBP20.71■□□□□ 0.91
SSR1-204ENST00000474597 ZMIZ2Q8NF64 920 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 GRK7Q8WTQ7 553 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 TMEM175Q9BSA9 504 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 DCLK3Q9C098 648 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 CSNK1G1Q9HCP0 422 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 DMAP1Q9NPF5 467 aaPredicted RBP20.71■□□□□ 0.91
SSR1-204ENST00000474597 CNGB3Q9NQW8 809 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 TMLHEQ9NVH6 421 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 NFU1Q9UMS0 254 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 DAB1O75553 588 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 UPP2O95045 317 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 OAZ2O95190 189 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 ECEL1O95672 775 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 MATKP42679 507 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 KCNJ1P48048 391 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 SLC11A1P49279 550 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 NDUFV1P49821 464 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 CACNA2D1P54289 1103 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 LRRTM3Q86VH5 581 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 LRRC43Q8N309 656 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 AENQ8WTP8 325 aaKnown RBP20.71■□□□□ 0.91
SSR1-204ENST00000474597 ATG4AQ8WYN0 398 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 PEBP4Q96S96 227 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 PKMYT1Q99640 499 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 DDX23Q9BUQ8 820 aaKnown RBP20.71■□□□□ 0.91
SSR1-204ENST00000474597 RHOBTB2Q9BYZ6 727 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 ULBP1Q9BZM6 244 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 TRIM31Q9BZY9 425 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 FAM114A2Q9NRY5 505 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 CHST7Q9NS84 486 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 FEZ2Q9UHY8 353 aaPredicted RBP20.71■□□□□ 0.91
SSR1-204ENST00000474597 PTPRDP23468 1912 aa20.71■□□□□ 0.91
SSR1-204ENST00000474597 RABGGTBP53611 331 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 YWHAZP63104 245 aaKnown RBP20.7■□□□□ 0.9
SSR1-204ENST00000474597 CCNG2Q16589 344 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 LRRC26Q2I0M4 334 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 BOLA3Q53S33 107 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 FAM171A1Q5VUB5 890 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 EMBQ6PCB8 327 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 DEFB106AQ8N104 65 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 CRIPAKQ8N1N5 446 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 EIF1ADQ8N9N8 165 aaKnown RBP20.7■□□□□ 0.9
SSR1-204ENST00000474597 CMASQ8NFW8 434 aaPredicted RBP20.7■□□□□ 0.9
SSR1-204ENST00000474597 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.7■□□□□ 0.9
SSR1-204ENST00000474597 NDRG1Q92597 394 aaKnown RBP20.7■□□□□ 0.9
SSR1-204ENST00000474597 CCDC114Q96M63 670 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 ERP44Q9BS26 406 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 TMEM106CQ9BVX2 250 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 FUT8Q9BYC5 575 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 DPH5Q9H2P9 285 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 PRDM5Q9NQX1 630 aaPredicted RBP20.7■□□□□ 0.9
SSR1-204ENST00000474597 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.7■□□□□ 0.97e-7■□□□□ 11
SSR1-204ENST00000474597 EFR3BQ9Y2G0 817 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 SF3B1O75533 1304 aaKnown RBP eCLIP20.7■□□□□ 0.91e-7■■■■■ 55.1
SSR1-204ENST00000474597 NLRC5Q86WI3 1866 aa20.7■□□□□ 0.9
SSR1-204ENST00000474597 C3orf70A6NLC5 250 aaPredicted RBP20.69■□□□□ 0.9
SSR1-204ENST00000474597 PTGIRP43119 386 aa20.69■□□□□ 0.9
SSR1-204ENST00000474597 KRT81Q14533 505 aa20.69■□□□□ 0.9
SSR1-204ENST00000474597 PPP1R7Q15435 360 aa20.69■□□□□ 0.9
SSR1-204ENST00000474597 DCAF6Q58WW2 860 aa20.69■□□□□ 0.9
SSR1-204ENST00000474597 RAB41Q5JT25 222 aa20.69■□□□□ 0.9
SSR1-204ENST00000474597 VARS2Q5ST30 1063 aaKnown RBP20.69■□□□□ 0.9
SSR1-204ENST00000474597 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.69■□□□□ 0.96e-9■■■■■ 61.6
SSR1-204ENST00000474597 NECAB2Q7Z6G3 386 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms