RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 KRT1P04264 644 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 FDX1P10109 184 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 ADSSP30520 456 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 NEK3P51956 506 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 CHN2P52757 468 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 SESN3P58005 492 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 MYL6P60660 151 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 GHRHRQ02643 423 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 CYP24A1Q07973 514 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 TFDP2Q14188 446 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 OASLQ15646 514 aaKnown RBP8.36□□□□□ -1.07
CCDC93-208ENST00000474546 USH1GQ495M9 461 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 ANGEL2Q5VTE6 544 aaKnown RBP8.36□□□□□ -1.07
CCDC93-208ENST00000474546 METTL21CQ5VZV1 264 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 TTBK2Q6IQ55 1244 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 IZUMO2Q6UXV1 221 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 B3GNT6Q6ZMB0 384 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 SPOCD1Q6ZMY3 1216 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 BBS12Q6ZW61 710 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 TXNRD3Q86VQ6 643 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 RASSF3Q86WH2 238 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 SP8Q8IXZ3 490 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 C7orf61Q8IZ16 206 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 TMEM35BQ8NCS4 154 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 TCP10LQ8TDR4 215 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 PPP4R1Q8TF05 950 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 FAM172AQ8WUF8 416 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 SLC44A1Q8WWI5 657 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 LENG1Q96BZ8 264 aaPredicted RBP8.36□□□□□ -1.07
CCDC93-208ENST00000474546 KREMEN1Q96MU8 473 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 ZDHHC15Q96MV8 337 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 SLITRK1Q96PX8 696 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 MIPEPQ99797 713 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 EPAS1Q99814 870 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 NRDE2Q9H7Z3 1164 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 IFT122Q9HBG6 1241 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 MLXIPLQ9NP71 852 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 HERC5Q9UII4 1024 aaKnown RBP8.36□□□□□ -1.07
CCDC93-208ENST00000474546 ZNRF3Q9ULT6 936 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 RAB26Q9ULW5 256 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 TBX20Q9UMR3 447 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 PRPF19Q9UMS4 504 aaKnown RBP8.36□□□□□ -1.07
CCDC93-208ENST00000474546 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC93-208ENST00000474546 DMTF1Q9Y222 760 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 XIRP2A4UGR9 3374 aa8.36□□□□□ -1.07
CCDC93-208ENST00000474546 COL4A1P02462 1669 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 FAM196BA6NMK8 535 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 CAPN14A8MX76 684 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 MCF2LO15068 1137 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 MED7O43513 233 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 DENRO43583 198 aaKnown RBP8.35□□□□□ -1.07
CCDC93-208ENST00000474546 OPHN1O60890 802 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 CLASP2O75122 1294 aaKnown RBP8.35□□□□□ -1.07
CCDC93-208ENST00000474546 KRT36O76013 467 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 CREB1P16220 341 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 GCAP28676 217 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 SERPINB3P29508 390 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 SLC16A2P36021 539 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 CCNFP41002 786 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 ETV4P43268 484 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 COPAP53621 1224 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 PRKAA2P54646 552 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 NLRP11P59045 1033 aaKnown RBP8.35□□□□□ -1.07
CCDC93-208ENST00000474546 PSMC5P62195 406 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 KCNA1Q09470 495 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 PTK7Q13308 1070 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 PICALMQ13492 652 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 MAMLD1Q13495 774 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 PSMD6Q15008 389 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 SLC1A5Q15758 541 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 ABCB5Q2M3G0 1257 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 CNPY1Q3B7I2 92 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 ANKRD20A4Q4UJ75 823 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 CFAP157Q5JU67 520 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 ZFYVE27Q5T4F4 411 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 RNF220Q5VTB9 566 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 ZNF746Q6NUN9 644 aaPredicted RBP8.35□□□□□ -1.07
CCDC93-208ENST00000474546 AADACL2Q6P093 401 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 DNAJC24Q6P3W2 148 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 DCUN1D2Q6PH85 259 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 DSTYKQ6XUX3 929 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 C3orf62Q6ZUJ4 267 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 NCAPG2Q86XI2 1143 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 PDSS2Q86YH6 399 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 KIAA0825Q8IV33 1275 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 ULK2Q8IYT8 1036 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 AHI1Q8N157 1196 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 C4orf33Q8N1A6 199 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 TTC39CQ8N584 583 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 SUPT20HQ8NEM7 779 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 TTC8Q8TAM2 541 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 RIN3Q8TB24 985 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 SLC35B2Q8TB61 432 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 NAT14Q8WUY8 206 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 ATP6V0A1Q93050 837 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 E2F7Q96AV8 911 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 FERMT1Q9BQL6 677 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 MXRA8Q9BRK3 442 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 NAT9Q9BTE0 207 aa8.35□□□□□ -1.07
CCDC93-208ENST00000474546 RNF208Q9H0X6 261 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms