RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, human

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-204	ENST00000474413	PFKL	P17858	780 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	TBXAS1	P24557	533 aa	Predicted RBP	18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	ERCC5	P28715	1186 aa	Predicted RBP	18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	PPP3CC	P48454	512 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	PTPN5	P54829	565 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	MLLT6	P55198	1093 aa	Predicted RBP	18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	PLCB2	Q00722	1185 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	GOLGA7B	Q2TAP0	167 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	GAB4	Q2WGN9	574 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	PKDCC	Q504Y2	493 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	MIIP	Q5JXC2	388 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	DPY19L2P1	Q6NXN4	242 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	GJB7	Q6PEY0	223 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	ZNF852	Q6ZMS4	543 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	RRAGA	Q7L523	313 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	BHLHA9	Q7RTU4	235 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	SCD5	Q86SK9	330 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	PPM1K	Q8N3J5	372 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	EHBP1	Q8NDI1	1231 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	PDZD8	Q8NEN9	1154 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	FAM86C1	Q9NVL1	165 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	COMMD8	Q9NX08	183 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	SMPD4	Q9NXE4	827 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	NDRG2	Q9UN36	371 aa	Known RBP	18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	SCML2	Q9UQR0	700 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	USP3	Q9Y6I4	520 aa		18.99	■□□□□ 0.63
EFNA1-204	ENST00000474413	KIAA1549L	Q6ZVL6	1849 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	LEFTY2	O00292	366 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	SCAMP3	O14828	347 aa	Known RBP	18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	GABBR2	O75899	941 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	RFX1	P22670	979 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	TUB	P50607	506 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	KIF11	P52732	1056 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	GCNT1	Q02742	428 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	EML3	Q32P44	896 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	HSP90AA4P	Q58FG1	418 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	RAB41	Q5JT25	222 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	TMEM270	Q6UE05	265 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	C11orf57	Q6ZUT1	292 aa	Predicted RBP	18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	CRACR2A	Q9BSW2	395 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	THAP9	Q9H5L6	903 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	SIX2	Q9NPC8	291 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	SAMSN1	Q9NSI8	373 aa	Known RBP	18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	TSPAN16	Q9UKR8	245 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	CNTN6	Q9UQ52	1028 aa		18.98	■□□□□ 0.63
EFNA1-204	ENST00000474413	CACNA1I	Q9P0X4	2223 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	PIEZO1	Q92508	2521 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	GREM1	O60565	184 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	TBX18	O95935	607 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	ABL1	P00519	1130 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	CHRNB1	P11230	501 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	SLC9A1	P19634	815 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	GAS6	Q14393	721 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	ANGPT1	Q15389	498 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	ITPRIPL2	Q3MIP1	535 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	TRIM65	Q6PJ69	517 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	PIGZ	Q86VD9	579 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	ANKRD52	Q8NB46	1076 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	RBBP8NL	Q8NC74	664 aa	Predicted RBP	18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	TTC16	Q8NEE8	873 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	CSGALNACT1	Q8TDX6	532 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	OSCP1	Q8WVF1	389 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	FAM3C	Q92520	227 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	PRRX2	Q99811	253 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	LINC00597	Q9H2U6	94 aa		18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413	RBM12	Q9NTZ6	932 aa	Known RBP	18.97	■□□□□ 0.63
EFNA1-204	ENST00000474413		A0A1W2PQH9	124 aa		18.96	■□□□□ 0.63
EFNA1-204	ENST00000474413	FGFR1OP	O95684	399 aa	Known RBP	18.96	■□□□□ 0.63
EFNA1-204	ENST00000474413	RPS9	P46781	194 aa	Known RBP	18.96	■□□□□ 0.63
EFNA1-204	ENST00000474413	KPNA1	P52294	538 aa	Predicted RBP	18.96	■□□□□ 0.63
EFNA1-204	ENST00000474413	PDE4C	Q08493	712 aa		18.96	■□□□□ 0.63
EFNA1-204	ENST00000474413	RUNX3	Q13761	415 aa		18.96	■□□□□ 0.63
EFNA1-204	ENST00000474413	CCDC186	Q7Z3E2	898 aa		18.96	■□□□□ 0.63
EFNA1-204	ENST00000474413	RALGPS2	Q86X27	583 aa	Predicted RBP	18.96	■□□□□ 0.63
EFNA1-204	ENST00000474413	C8orf33	Q9H7E9	229 aa	Predicted RBP	18.96	■□□□□ 0.63
EFNA1-204	ENST00000474413	CYLD	Q9NQC7	956 aa		18.96	■□□□□ 0.63
EFNA1-204	ENST00000474413	THG1L	Q9NWX6	298 aa	Known RBP	18.96	■□□□□ 0.63
EFNA1-204	ENST00000474413	TMEM63C	Q9P1W3	806 aa		18.96	■□□□□ 0.63
EFNA1-204	ENST00000474413	CFAP97	Q9P2B7	532 aa		18.96	■□□□□ 0.63
EFNA1-204	ENST00000474413	BECN2	A8MW95	431 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	MAN2B1	O00754	1011 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	TLR5	O60602	858 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	PAEP	P09466	180 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	CD19	P15391	556 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	BRD2	P25440	801 aa	Known RBP	18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	PDE6C	P51160	858 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	YWHAE	P62258	255 aa	Known RBP	18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	PDGFRL	Q15198	375 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	SGO2	Q562F6	1265 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	HECTD3	Q5T447	861 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	CDKAL1	Q5VV42	579 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413		Q6ZS52	159 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	EZH1	Q92800	747 aa	Predicted RBP	18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	FAM122A	Q96E09	287 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	MSANTD3	Q96H12	275 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	CHRD	Q9H2X0	955 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	FBXO44	Q9H4M3	255 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	FBRSL1	Q9HCM7	1045 aa	Known RBP	18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	ACP6	Q9NPH0	428 aa		18.95	■□□□□ 0.62
EFNA1-204	ENST00000474413	C2orf42	Q9NWW7	574 aa		18.95	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms