RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 LMNAP02545 664 aaKnown RBP19.71■□□□□ 0.75
CCDC171-206ENST00000474193 CHRNB1P11230 501 aa19.71■□□□□ 0.75
CCDC171-206ENST00000474193 TCF3P15923 654 aa19.71■□□□□ 0.75
CCDC171-206ENST00000474193 CD58P19256 250 aa19.71■□□□□ 0.75
CCDC171-206ENST00000474193 CDK11BP21127 795 aaKnown RBP19.71■□□□□ 0.75
CCDC171-206ENST00000474193 CXCL12P48061 93 aa19.71■□□□□ 0.75
CCDC171-206ENST00000474193 MARSP56192 900 aaKnown RBP19.71■□□□□ 0.75
CCDC171-206ENST00000474193 INCA1Q0VD86 236 aa19.71■□□□□ 0.75
CCDC171-206ENST00000474193 CETN1Q12798 172 aa19.71■□□□□ 0.75
CCDC171-206ENST00000474193 FZD5Q13467 585 aa19.71■□□□□ 0.75
CCDC171-206ENST00000474193 FUKQ8N0W3 1084 aa19.71■□□□□ 0.75
CCDC171-206ENST00000474193 SLC22A12Q96S37 553 aa19.71■□□□□ 0.75
CCDC171-206ENST00000474193 NACA2Q9H009 215 aa19.71■□□□□ 0.75
CCDC171-206ENST00000474193 R4GN57 208 aa19.71■□□□□ 0.75
CCDC171-206ENST00000474193 PTPRDP23468 1912 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 SHISA7A6NL88 538 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 NFATC1O95644 943 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 MBL2P11226 248 aaPredicted RBP19.7■□□□□ 0.74
CCDC171-206ENST00000474193 CCDC130P13994 396 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 EEF1GP26641 437 aaKnown RBP19.7■□□□□ 0.74
CCDC171-206ENST00000474193 ADORA2BP29275 332 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 CACNA2D1P54289 1103 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 MAP3K7CLP57077 242 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 MCCD1P59942 119 aaPredicted RBP19.7■□□□□ 0.74
CCDC171-206ENST00000474193 YWHAEP62258 255 aaKnown RBP19.7■□□□□ 0.74
CCDC171-206ENST00000474193 ORC1Q13415 861 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 ZNF77Q15935 545 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 HSP90AA4PQ58FG1 418 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 HECTD3Q5T447 861 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 TRIM68Q6AZZ1 485 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 SPEM1Q8N4L4 309 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 KIAA1958Q8N8K9 716 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 HEXIM2Q96MH2 286 aaKnown RBP19.7■□□□□ 0.74
CCDC171-206ENST00000474193 HNRNPABQ99729 332 aaKnown RBP19.7■□□□□ 0.74
CCDC171-206ENST00000474193 FAM49BQ9NUQ9 324 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 FANCLQ9NW38 375 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 ZSCAN32Q9NX65 697 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 CHORDC1Q9UHD1 332 aaPredicted RBP19.7■□□□□ 0.74
CCDC171-206ENST00000474193 PCDHGA2Q9Y5H1 932 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 OBSL1O75147 1896 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 GREB1Q4ZG55 1949 aa19.7■□□□□ 0.74
CCDC171-206ENST00000474193 ZFHX2Q9C0A1 2572 aaPredicted RBP19.69■□□□□ 0.74
CCDC171-206ENST00000474193 KCNJ18B7U540 433 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 GOLGA6L19H0YKK7 550 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 ATG13O75143 517 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 SLC5A3P53794 718 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 SLC8A3P57103 927 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 SLC7A9P82251 487 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 USP4Q13107 963 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 KCNJ12Q14500 433 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 PAQR9Q6ZVX9 377 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 TRIM59Q8IWR1 403 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 ZNF687Q8N1G0 1237 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 C12orf29Q8N999 325 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 CCDC26Q8TAB7 109 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 ECT2Q9H8V3 914 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 APOBEC3GQ9HC16 384 aaKnown RBP19.69■□□□□ 0.74
CCDC171-206ENST00000474193 HPS4Q9NQG7 708 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 TLR8Q9NR97 1041 aaKnown RBP19.69■□□□□ 0.74
CCDC171-206ENST00000474193 SAMSN1Q9NSI8 373 aaKnown RBP19.69■□□□□ 0.74
CCDC171-206ENST00000474193 MYH10P35580 1976 aa19.69■□□□□ 0.74
CCDC171-206ENST00000474193 COL4A3Q01955 1670 aa19.68■□□□□ 0.74
CCDC171-206ENST00000474193 LEFTY2O00292 366 aa19.68■□□□□ 0.74
CCDC171-206ENST00000474193 PES1O00541 588 aaKnown RBP19.68■□□□□ 0.74
CCDC171-206ENST00000474193 CILPO75339 1184 aa19.68■□□□□ 0.74
CCDC171-206ENST00000474193 AFPP02771 609 aaKnown RBP19.68■□□□□ 0.74
CCDC171-206ENST00000474193 PRKCSHP14314 528 aaPredicted RBP19.68■□□□□ 0.74
CCDC171-206ENST00000474193 ARSAP15289 507 aa19.68■□□□□ 0.74
CCDC171-206ENST00000474193 DRD1P21728 446 aa19.68■□□□□ 0.74
CCDC171-206ENST00000474193 TXNDC11Q6PKC3 985 aa19.68■□□□□ 0.74
CCDC171-206ENST00000474193 ASCL5Q7RTU5 278 aa19.68■□□□□ 0.74
CCDC171-206ENST00000474193 MAML2Q8IZL2 1156 aaPredicted RBP19.68■□□□□ 0.74
CCDC171-206ENST00000474193 SLC35C1Q96A29 364 aa19.68■□□□□ 0.74
CCDC171-206ENST00000474193 CSNK1G1Q9HCP0 422 aa19.68■□□□□ 0.74
CCDC171-206ENST00000474193 CPQQ9Y646 472 aa19.68■□□□□ 0.74
CCDC171-206ENST00000474193 WNT6Q9Y6F9 365 aa19.68■□□□□ 0.74
CCDC171-206ENST00000474193 ANAPC1Q9H1A4 1944 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 TRDMT1O14717 391 aaKnown RBP19.67■□□□□ 0.74
CCDC171-206ENST00000474193 ZNF445P59923 1031 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 KCNH2Q12809 1159 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 FBXO43Q4G163 708 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 ZNF394Q53GI3 561 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 TCP11X2Q5H9J9 407 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 IRF2BP1Q8IU81 584 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 SCAMP5Q8TAC9 235 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 SECISBP2LQ93073 1101 aaKnown RBP19.67■□□□□ 0.74
CCDC171-206ENST00000474193 SMOQ99835 787 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 P2RY13Q9BPV8 354 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 HINFPQ9BQA5 517 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 TUBGCP2Q9BSJ2 902 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 RNF38Q9H0F5 515 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 CBX8Q9HC52 389 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 PRMT8Q9NR22 394 aaPredicted RBP19.67■□□□□ 0.74
CCDC171-206ENST00000474193 TMEM30AQ9NV96 361 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 IL37Q9NZH6 218 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 TBC1D14Q9P2M4 693 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 HMGXB4Q9UGU5 601 aa19.67■□□□□ 0.74
CCDC171-206ENST00000474193 COL4A2P08572 1712 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 TNFRSF10BO14763 440 aa19.66■□□□□ 0.74
CCDC171-206ENST00000474193 OAS1P00973 400 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms