RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 VWA3BQ502W6 1294 aa15□□□□□ -0.01
VAMP4-203ENST00000474047 C1orf228Q6PIY5 440 aa15□□□□□ -0.01
VAMP4-203ENST00000474047 TRIM65Q6PJ69 517 aa15□□□□□ -0.01
VAMP4-203ENST00000474047 ENOSF1Q7L5Y1 443 aa15□□□□□ -0.01
VAMP4-203ENST00000474047 GPRIN1Q7Z2K8 1008 aa15□□□□□ -0.01
VAMP4-203ENST00000474047 DDX42Q86XP3 938 aaKnown RBP eCLIP15□□□□□ -0.01
VAMP4-203ENST00000474047 RBBP8NLQ8NC74 664 aaPredicted RBP15□□□□□ -0.01
VAMP4-203ENST00000474047 MSANTD3Q96H12 275 aa15□□□□□ -0.01
VAMP4-203ENST00000474047 RNF38Q9H0F5 515 aa15□□□□□ -0.01
VAMP4-203ENST00000474047 EBF3Q9H4W6 596 aa15□□□□□ -0.01
VAMP4-203ENST00000474047 LTB4R2Q9NPC1 389 aa15□□□□□ -0.01
VAMP4-203ENST00000474047 TSPAN16Q9UKR8 245 aa15□□□□□ -0.01
VAMP4-203ENST00000474047 SCML2Q9UQR0 700 aa15□□□□□ -0.01
VAMP4-203ENST00000474047 CPQQ9Y646 472 aa15□□□□□ -0.01
VAMP4-203ENST00000474047 GTPBP10A4D1E9 387 aaKnown RBP14.99□□□□□ -0.01
VAMP4-203ENST00000474047 HHLA1C9JL84 531 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 LEFTY2O00292 366 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 GALR2O43603 387 aaPredicted RBP14.99□□□□□ -0.01
VAMP4-203ENST00000474047 OAS1P00973 400 aaKnown RBP14.99□□□□□ -0.01
VAMP4-203ENST00000474047 SLC9A1P19634 815 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 KIF11P52732 1056 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 PTPN5P54829 565 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 SLC7A9P82251 487 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 AMPD2Q01433 879 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 BST2Q10589 180 aaKnown RBP14.99□□□□□ -0.01
VAMP4-203ENST00000474047 RUNX3Q13761 415 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 TRIM68Q6AZZ1 485 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 UBR7Q8N806 425 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 DTWD2Q8NBA8 298 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 UBA3Q8TBC4 463 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 ENOX1Q8TC92 643 aaKnown RBP14.99□□□□□ -0.01
VAMP4-203ENST00000474047 FAM122AQ96E09 287 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 DDX23Q9BUQ8 820 aaKnown RBP14.99□□□□□ -0.01
VAMP4-203ENST00000474047 OSBPL6Q9BZF3 934 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 UBXN6Q9BZV1 441 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 IRF2BPLQ9H1B7 796 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 NDST4Q9H3R1 872 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 CCSER2Q9H7U1 834 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 SAMSN1Q9NSI8 373 aaKnown RBP14.99□□□□□ -0.01
VAMP4-203ENST00000474047 NAGPAQ9UK23 515 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 MTF2Q9Y483 593 aaPredicted RBP14.99□□□□□ -0.01
VAMP4-203ENST00000474047 KMT2EQ8IZD2 1858 aa14.99□□□□□ -0.01
VAMP4-203ENST00000474047 ZNF318Q5VUA4 2279 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 FAM92AA1XBS5 289 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 ARNTLO00327 626 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 CYP26A1O43174 497 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 COCHO43405 550 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 EEF1GP26641 437 aaKnown RBP14.98□□□□□ -0.01
VAMP4-203ENST00000474047 SOX9P48436 509 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 MLLT6P55198 1093 aaPredicted RBP14.98□□□□□ -0.01
VAMP4-203ENST00000474047 USP4Q13107 963 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 NR1H3Q13133 447 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 STILQ15468 1287 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 ZNF77Q15935 545 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 ARHGAP44Q17R89 818 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 TCP11X2Q5H9J9 407 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 SNX30Q5VWJ9 437 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 PIGZQ86VD9 579 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 RALGPS2Q86X27 583 aaPredicted RBP14.98□□□□□ -0.01
VAMP4-203ENST00000474047 CCDC105Q8IYK2 499 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 CPA6Q8N4T0 437 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 ATP2A3Q93084 1043 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 FAM83CQ9BQN1 747 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 LRRC4Q9HBW1 653 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 CFAP97Q9P2B7 532 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 WNT6Q9Y6F9 365 aa14.98□□□□□ -0.01
VAMP4-203ENST00000474047 SPECC1L-ADORA2AF8WAN1 911 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 RNF225M0QZC1 329 aaPredicted RBP14.97□□□□□ -0.01
VAMP4-203ENST00000474047 SLC9A3R1O14745 358 aaPredicted RBP14.97□□□□□ -0.01
VAMP4-203ENST00000474047 TLR5O60602 858 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 RALAP11233 206 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 ARSAP15289 507 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 BRD2P25440 801 aaKnown RBP14.97□□□□□ -0.01
VAMP4-203ENST00000474047 TARSP26639 723 aaKnown RBP14.97□□□□□ -0.01
VAMP4-203ENST00000474047 ATP5C1P36542 298 aaKnown RBP14.97□□□□□ -0.01
VAMP4-203ENST00000474047 PSEN1P49768 467 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 TUBP50607 506 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 PDE4CQ08493 712 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 CAVIN1Q6NZI2 390 aaKnown RBP14.97□□□□□ -0.01
VAMP4-203ENST00000474047 TADA2BQ86TJ2 420 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 TTC30AQ86WT1 665 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 ANKRD20A12PQ8NF67 263 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 PRSS33Q8NF86 280 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 OSCP1Q8WVF1 389 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 EXOC4Q96A65 974 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 KREMEN1Q96MU8 473 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 NAT10Q9H0A0 1025 aaKnown RBP14.97□□□□□ -0.01
VAMP4-203ENST00000474047 APEX2Q9UBZ4 518 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 SH3BP1Q9Y3L3 701 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 A0A1W2PQH9 124 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 M0QYV0 167 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 O00370 1275 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 XPO1O14980 1071 aaKnown RBP14.97□□□□□ -0.01
VAMP4-203ENST00000474047 ZDHHC11BP0C7U3 371 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 SETSIPP0DME0 302 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 TCF3P15923 654 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 PON1P27169 355 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 CTHP32929 405 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 TKTL1P51854 596 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 GOLGA8FQ08AF8 430 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms