RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SMPD4Q9NXE4 827 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 USP22Q9UPT9 525 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 NOX1Q9Y5S8 564 aa4.85□□□□□ -1.63
BRCA1-212ENST00000473961 CYR61O00622 381 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 HOXC11O43248 304 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-212ENST00000473961 TK1P04183 234 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 CENPBP07199 599 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-212ENST00000473961 TACR2P21452 398 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 TNFAIP3P21580 790 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 COMTP21964 271 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 FGFR4P22455 802 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 BDNFP23560 247 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 ACVRL1P37023 503 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 NPTX2P47972 431 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 ZNF134P52741 427 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 HSD11B2P80365 405 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 G3BP1Q13283 466 aaKnown RBP eCLIP4.84□□□□□ -1.63
BRCA1-212ENST00000473961 CRHR2Q13324 411 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 TUBB3Q13509 450 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 DYRK1AQ13627 763 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 CLCA4Q14CN2 919 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 ANKRD1Q15327 319 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 RGS7BPQ6MZT1 257 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-212ENST00000473961 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-212ENST00000473961 GDF7Q7Z4P5 450 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 KCTD20Q7Z5Y7 419 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 TICAM2Q86XR7 235 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 ZNF280BQ86YH2 543 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 FUKQ8N0W3 1084 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 NSUN7Q8NE18 718 aaKnown RBP4.84□□□□□ -1.63
BRCA1-212ENST00000473961 DNAJB14Q8TBM8 379 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 ATRIPQ8WXE1 791 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 HDAC2Q92769 488 aaKnown RBP4.84□□□□□ -1.63
BRCA1-212ENST00000473961 GOLGA1Q92805 767 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 C3orf49Q96BT1 292 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 GNRHR2Q96P88 292 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 UBN1Q9NPG3 1134 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 MRPS18AQ9NVS2 196 aaKnown RBP4.84□□□□□ -1.63
BRCA1-212ENST00000473961 CTTNBP2NLQ9P2B4 639 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 FEM1BQ9UK73 627 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 NDRG4Q9ULP0 352 aaKnown RBP4.84□□□□□ -1.63
BRCA1-212ENST00000473961 SCAF8Q9UPN6 1271 aaKnown RBP4.84□□□□□ -1.63
BRCA1-212ENST00000473961 FPGT-TNNI3KV9GXZ4 949 aa4.84□□□□□ -1.63
BRCA1-212ENST00000473961 GAGE12BA1L429 117 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 GAGE12HA6NDE8 117 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 J3KTA2 159 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 PSMD9O00233 223 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 PCDH17O14917 1159 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 SUN1O94901 812 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 LARGE1O95461 756 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 PRKCBP05771 671 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 CNTFP26441 200 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 APOBEC3AP31941 199 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-212ENST00000473961 GATMP50440 423 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 CDK7P50613 346 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 TOB1P50616 345 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-212ENST00000473961 OCA2Q04671 838 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 MAPK7Q13164 816 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 SLC12A1Q13621 1099 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 BOP1Q14137 746 aaKnown RBP4.83□□□□□ -1.64
BRCA1-212ENST00000473961 SIM2Q14190 667 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-212ENST00000473961 TRIM60Q495X7 471 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 TEDDM1Q5T9Z0 273 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 ABLIM2Q6H8Q1 611 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 TCTN3Q6NUS6 607 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 DSTYKQ6XUX3 929 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 C4orf50Q6ZRC1 276 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 RAB11FIP4Q86YS3 637 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 SYT12Q8IV01 421 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 SYNE4Q8N205 404 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 FSTL5Q8N475 847 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-212ENST00000473961 USP38Q8NB14 1042 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 NGDNQ8NEJ9 315 aaKnown RBP4.83□□□□□ -1.64
BRCA1-212ENST00000473961 CPT1CQ8TCG5 803 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 OSCP1Q8WVF1 389 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 MAELQ96JY0 434 aaKnown RBP4.83□□□□□ -1.64
BRCA1-212ENST00000473961 EIF3CQ99613 913 aaKnown RBP4.83□□□□□ -1.64
BRCA1-212ENST00000473961 EPS8L2Q9H6S3 715 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 CXorf36Q9H7Y0 433 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 MLXIPQ9HAP2 919 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 TRIM36Q9NQ86 728 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 AURKAIP1Q9NWT8 199 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-212ENST00000473961 TRPM5Q9NZQ8 1165 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 PI4KBQ9UBF8 816 aa4.83□□□□□ -1.64
BRCA1-212ENST00000473961 AATKQ6ZMQ8 1374 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 H0Y3Z8 333 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 hCG_1984214I3L0E3 225 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 LEFTY2O00292 366 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 SEPT4O43236 478 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 TSPAN3O60637 253 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 RPS6KA4O75676 772 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 RHOBTB3O94955 611 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 PLATP00750 562 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 TFRCP02786 760 aaKnown RBP4.82□□□□□ -1.64
BRCA1-212ENST00000473961 POLBP06746 335 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 CKMT1AP12532 417 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 GYS1P13807 737 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 CNR2P34972 360 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 RABGGTBP53611 331 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 EIF5P55010 431 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms