RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	SLCO1B1	Q9Y6L6	691 aa		10.26	□□□□□ -0.77
MCF2L-223	ENST00000473345	PLXND1	Q9Y4D7	1925 aa		10.26	□□□□□ -0.77
MCF2L-223	ENST00000473345	NBEA	Q8NFP9	2946 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	UPK3BL1	B0FP48	263 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	PRRT4	C9JH25	899 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	UPK3BL2	E5RIL1	263 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	SH3BP5	O60239	455 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	TULP3	O75386	442 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	ABL1	P00519	1130 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	CFI	P05156	583 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	ADH5	P11766	374 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	MAOB	P27338	520 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	PCSK1	P29120	753 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	GRIA2	P42262	883 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	BNC1	Q01954	994 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	IFRD2	Q12894	506 aa	Predicted RBP	10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	NR1H3	Q13133	447 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	ACAP1	Q15027	740 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	POSTN	Q15063	836 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	VSTM1	Q6UX27	236 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	PROSER1	Q86XN7	944 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	MINDY1	Q8N5J2	469 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	KRI1	Q8N9T8	703 aa	Known RBP	10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	ZMIZ2	Q8NF64	920 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	WHAMM	Q8TF30	809 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	C8orf48	Q96LL4	319 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	ACCS	Q96QU6	501 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	GTPBP2	Q9BX10	602 aa	Known RBP	10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	SDCBP2	Q9H190	292 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	XYLT2	Q9H1B5	865 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	OLFML3	Q9NRN5	406 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	GPSM3	Q9Y4H4	160 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	RAD54B	Q9Y620	910 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	ITPR1	Q14643	2758 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	LAMA5	O15230	3695 aa		10.25	□□□□□ -0.77
MCF2L-223	ENST00000473345	WASH3P	C4AMC7	463 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	TGFB1I1	O43294	461 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	BEST1	O76090	585 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	TBX18	O95935	607 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	APOD	P05090	189 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	SERPINF2	P08697	491 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	TMEM191B	P0C7N4	346 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	MBL2	P11226	248 aa	Predicted RBP	10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	PTPN1	P18031	435 aa	Known RBP	10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	NDUFV2	P19404	249 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	EIF2D	P41214	584 aa	Known RBP	10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	CDH8	P55286	799 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	RPL6	Q02878	288 aa	Known RBP	10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	SCAP	Q12770	1279 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	LMAN2	Q12907	356 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	C4orf50	Q6ZRC1	276 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	DPH6	Q7L8W6	267 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	TRAPPC11	Q7Z392	1133 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	SLCO6A1	Q86UG4	719 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	C11orf74	Q86VG3	221 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	GPD1L	Q8N335	351 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	FSIP1	Q8NA03	581 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	CRELD1	Q96HD1	420 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	NUSAP1	Q9BXS6	441 aa	Known RBP	10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	SMYD3	Q9H7B4	428 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	IL21R	Q9HBE5	538 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	OSER1	Q9NX31	292 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	IL37	Q9NZH6	218 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	CYP8B1	Q9UNU6	501 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	PLXNB3	Q9ULL4	1909 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	LOC400499	M0QZD8	3231 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	PCNX2	A6NKB5	2137 aa		10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345	DSP	P15924	2871 aa	Known RBP	10.24	□□□□□ -0.77
MCF2L-223	ENST00000473345		H3BQV1	296 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	HOXC11	O43248	304 aa	Predicted RBP	10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	MAP3K13	O43283	966 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	CBFA2T3	O75081	653 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	ZIC2	O95409	532 aa	Predicted RBP	10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	ZDHHC11B	P0C7U3	371 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	IDE	P14735	1019 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	TNFRSF4	P43489	277 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	CASP4	P49662	377 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	MYL6	P60660	151 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	ZNF33A	Q06730	810 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	ORC1	Q13415	861 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	EOGT	Q5NDL2	527 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	C10orf76	Q5T2E6	689 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	HS2ST1	Q7LGA3	356 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	PGBD3	Q8N328	593 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	ZNF513	Q8N8E2	541 aa	Predicted RBP	10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	TRIML1	Q8N9V2	468 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	TERB1	Q8NA31	727 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	RDH13	Q8NBN7	331 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	RASSF8	Q8NHQ8	419 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	CACTIN	Q8WUQ7	758 aa	Known RBP	10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	HSPA12B	Q96MM6	686 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	DNAAF2	Q9NVR5	837 aa	Known RBP	10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	TOR4A	Q9NXH8	423 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	HSPBP1	Q9NZL4	362 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	GMIP	Q9P107	970 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	SEL1L	Q9UBV2	794 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	STK17A	Q9UEE5	414 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	HMGXB4	Q9UGU5	601 aa		10.23	□□□□□ -0.77

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