RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 DMAP1Q9NPF5 467 aaPredicted RBP17.68■□□□□ 0.42
USP40-212ENST00000473191 ATP6V1DQ9Y5K8 247 aa17.68■□□□□ 0.42
USP40-212ENST00000473191 HHLA1C9JL84 531 aa17.67■□□□□ 0.42
USP40-212ENST00000473191 CD58P19256 250 aa17.67■□□□□ 0.42
USP40-212ENST00000473191 DRD1P21728 446 aa17.67■□□□□ 0.42
USP40-212ENST00000473191 SEC13P55735 322 aa17.67■□□□□ 0.42
USP40-212ENST00000473191 INTS8Q75QN2 995 aaKnown RBP17.67■□□□□ 0.42
USP40-212ENST00000473191 WDR5BQ86VZ2 330 aa17.67■□□□□ 0.42
USP40-212ENST00000473191 CCDC47Q96A33 483 aaKnown RBP17.67■□□□□ 0.42
USP40-212ENST00000473191 CSNK1G1Q9HCP0 422 aa17.67■□□□□ 0.42
USP40-212ENST00000473191 OSER1Q9NX31 292 aa17.67■□□□□ 0.42
USP40-212ENST00000473191 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.67■□□□□ 0.42
USP40-212ENST00000473191 FAM92AA1XBS5 289 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 TRIM49BA6NDI0 452 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 K7EQS6 105 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 RTN3O95197 1032 aaPredicted RBP17.66■□□□□ 0.42
USP40-212ENST00000473191 TBX18O95935 607 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 ZDHHC11BP0C7U3 371 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 PFKLP17858 780 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 PSMC2P35998 433 aaKnown RBP17.66■□□□□ 0.42
USP40-212ENST00000473191 PPP3CCP48454 512 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 INCA1Q0VD86 236 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 DHCR24Q15392 516 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 ZNF394Q53GI3 561 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 RHBDF2Q6PJF5 856 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 CLEC20AQ6ZU45 233 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 FAM160A2Q8N612 972 aaPredicted RBP17.66■□□□□ 0.42
USP40-212ENST00000473191 TAF4BQ92750 862 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 ARID3AQ99856 593 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 ZDHHC4Q9NPG8 344 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 DLL3Q9NYJ7 618 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 EHD2Q9NZN4 543 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 USP18Q9UMW8 372 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 MYOFQ9NZM1 2061 aa17.66■□□□□ 0.42
USP40-212ENST00000473191 KIF20AO95235 890 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 NFATC1O95644 943 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 IRF1P10914 325 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 CHRM1P11229 460 aaPredicted RBP17.65■□□□□ 0.42
USP40-212ENST00000473191 KRT13P13646 458 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 P4HA1P13674 534 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 HOXA6P31267 233 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 PDE6CP51160 858 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 AMPD2Q01433 879 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 CCDC6Q16204 474 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 SNX30Q5VWJ9 437 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 LAIR1Q6GTX8 287 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 ISM2Q6H9L7 571 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 UNC93AQ86WB7 457 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 TATDN2Q93075 761 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 CYFIP2Q96F07 1278 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 NMUR1Q9HB89 426 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 TMEM8AQ9HCN3 771 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 GMEB2Q9UKD1 530 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 NUDT5Q9UKK9 219 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 SLC8A2Q9UPR5 921 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 MYH10P35580 1976 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 ATP8B3O60423 1300 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 SPTBN4Q9H254 2564 aa17.65■□□□□ 0.42
USP40-212ENST00000473191 MED19A0JLT2 244 aaPredicted RBP17.64■□□□□ 0.41
USP40-212ENST00000473191 MDM4O15151 490 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 CYP26A1O43174 497 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 CILPO75339 1184 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 HNRNPLP14866 589 aaKnown RBP eCLIP17.64■□□□□ 0.41
USP40-212ENST00000473191 MCCD1P59942 119 aaPredicted RBP17.64■□□□□ 0.41
USP40-212ENST00000473191 EDRF1Q3B7T1 1238 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 CBWD6Q4V339 395 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 C2orf27AQ580R0 203 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 CBWD3Q5JTY5 395 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 CBWD5Q5RIA9 395 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 HECTD3Q5T447 861 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 PPP1R26Q5T8A7 1209 aaPredicted RBP17.64■□□□□ 0.41
USP40-212ENST00000473191 EMC10Q5UCC4 262 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 ANKRD40Q6AI12 368 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 KBTBD6Q86V97 674 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 BBS7Q8IWZ6 715 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 OVCA2Q8WZ82 227 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 HNRNPABQ99729 332 aaKnown RBP17.64■□□□□ 0.41
USP40-212ENST00000473191 NIF3L1Q9GZT8 377 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 RAB23Q9ULC3 237 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 PCDHA5Q9Y5H7 936 aa17.64■□□□□ 0.41
USP40-212ENST00000473191 DCLK1O15075 740 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 TRIM24O15164 1050 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 RPL13P26373 211 aaKnown RBP17.63■□□□□ 0.41
USP40-212ENST00000473191 NR1H3Q13133 447 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 DMC1Q14565 340 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 FBXO43Q4G163 708 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 LY6G5CQ5SRR4 150 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 ZNF658Q5TYW1 1059 aaPredicted RBP17.63■□□□□ 0.41
USP40-212ENST00000473191 KRT39Q6A163 491 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 CEP68Q76N32 757 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 SYT13Q7L8C5 426 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.63■□□□□ 0.41
USP40-212ENST00000473191 CCDC33Q8N5R6 958 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 NAT16Q8N8M0 369 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 PDZD8Q8NEN9 1154 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 USP33Q8TEY7 942 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 SECISBP2LQ93073 1101 aaKnown RBP17.63■□□□□ 0.41
USP40-212ENST00000473191 NT5C1AQ9BXI3 368 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 INVSQ9Y283 1065 aa17.63■□□□□ 0.41
USP40-212ENST00000473191 AXIN1O15169 862 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms