RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 UBL4BQ8N7F7 174 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 KLHL23Q8NBE8 558 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 MNS1Q8NEH6 495 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 PIK3R5Q8WYR1 880 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 TSC1Q92574 1164 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 RAD9AQ99638 391 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 SEPT5Q99719 369 aaPredicted RBP13.21□□□□□ -0.29
PCCB-211ENST00000473073 MTRRQ9UBK8 725 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 MTUS1Q9ULD2 1270 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 PCDHB12Q9Y5F1 795 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 PLXNA4Q9HCM2 1894 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 MIF4GDA9UHW6 222 aaKnown RBP13.21□□□□□ -0.29
PCCB-211ENST00000473073 LRCH4O75427 683 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 SLC1A1P43005 524 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 ZNF143P52747 638 aaPredicted RBP13.21□□□□□ -0.29
PCCB-211ENST00000473073 DAOAP59103 153 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 DSG1Q02413 1049 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 C2orf54Q08AI8 447 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 GPR17Q13304 367 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 PIGHQ14442 188 aaPredicted RBP13.21□□□□□ -0.29
PCCB-211ENST00000473073 SMTNL2Q2TAL5 461 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 MGAT5BQ3V5L5 792 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 CCDC181Q5TID7 509 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 SLC26A9Q7LBE3 791 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 BHLHA9Q7RTU4 235 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 ADAT2Q7Z6V5 191 aaKnown RBP13.21□□□□□ -0.29
PCCB-211ENST00000473073 DDX53Q86TM3 631 aaKnown RBP13.21□□□□□ -0.29
PCCB-211ENST00000473073 CLSTN3Q9BQT9 956 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 HERC2P3Q9BVR0 1158 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 ZWILCHQ9H900 591 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 PCSK1NQ9UHG2 260 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 PCDHA3Q9Y5H8 950 aa13.21□□□□□ -0.29
PCCB-211ENST00000473073 TNRC18O15417 2968 aaPredicted RBP13.21□□□□□ -0.3
PCCB-211ENST00000473073 CCDC66A2RUB6 948 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 URODP06132 367 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 PYGMP11217 842 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 CTNNA2P26232 953 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 IL1R2P27930 398 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 MAN1A1P33908 653 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 ATXN1P54253 815 aaKnown RBP13.2□□□□□ -0.3
PCCB-211ENST00000473073 PITX1P78337 314 aaPredicted RBP13.2□□□□□ -0.3
PCCB-211ENST00000473073 DUSP4Q13115 394 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 SHHQ15465 462 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 KCNT1Q5JUK3 1230 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 SLC8B1Q6J4K2 584 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 DEFB106AQ8N104 65 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 NIPA2Q8N8Q9 360 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 MYRIPQ8NFW9 859 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 FNIP1Q8TF40 1166 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 CLP1Q92989 425 aaKnown RBP13.2□□□□□ -0.3
PCCB-211ENST00000473073 FUBP3Q96I24 572 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCCB-211ENST00000473073 RNPC3Q96LT9 517 aaKnown RBP13.2□□□□□ -0.3
PCCB-211ENST00000473073 NGRNQ9NPE2 291 aaKnown RBP13.2□□□□□ -0.3
PCCB-211ENST00000473073 AAASQ9NRG9 546 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 CALCOCO1Q9P1Z2 691 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 MYO16Q9Y6X6 1858 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 TNFRSF10BO14763 440 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 ZBED1O96006 694 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 SDC4P31431 198 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 CTNNB1P35222 781 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 PPM1AP35813 382 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 PGFP49763 221 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 KCTD19Q17RG1 926 aaPredicted RBP13.2□□□□□ -0.3
PCCB-211ENST00000473073 DCAF6Q58WW2 860 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 ZFYVE27Q5T4F4 411 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 SYPL2Q5VXT5 272 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 RHOT1Q8IXI2 618 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
PCCB-211ENST00000473073 FAM172AQ8WUF8 416 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 EDEM1Q92611 657 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 PBKQ96KB5 322 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 C17orf80Q9BSJ5 609 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 MTIF3Q9H2K0 278 aaKnown RBP13.2□□□□□ -0.3
PCCB-211ENST00000473073 ALG13Q9NP73 1137 aaKnown RBP13.2□□□□□ -0.3
PCCB-211ENST00000473073 CNGB3Q9NQW8 809 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 NAALADL1Q9UQQ1 740 aa13.2□□□□□ -0.3
PCCB-211ENST00000473073 SYNJ2BP-COX16A0A087WUM0 186 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 UQCRHLA0A096LP55 91 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 PI4K2BG5E9Z4 385 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 HSF2BPO75031 334 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 FYNP06241 537 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 UQCRHP07919 91 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 MIPP30301 263 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 RWDD2BP57060 319 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 USP46P62068 366 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 YWHAZP63104 245 aaKnown RBP13.19□□□□□ -0.3
PCCB-211ENST00000473073 SLC25A11Q02978 314 aaKnown RBP13.19□□□□□ -0.3
PCCB-211ENST00000473073 MTMR3Q13615 1198 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 TUBB2AQ13885 445 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 EFHC1Q5JVL4 640 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 RASIP1Q5U651 963 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 ANKS1BQ7Z6G8 1248 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 ADAM32Q8TC27 787 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 PHOSPHO2Q8TCD6 241 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 PEBP4Q96S96 227 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 TBCBQ99426 244 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 CNPY3Q9BT09 278 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 TUBB2BQ9BVA1 445 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 UBXN6Q9BZV1 441 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 CARD9Q9H257 536 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms