RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 INTS8Q75QN2 995 aaKnown RBP16.22■□□□□ 0.19
VTI1A-203ENST00000472892 SYT13Q7L8C5 426 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 FILIP1Q7Z7B0 1213 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 FAM160A2Q8N612 972 aaPredicted RBP16.22■□□□□ 0.19
VTI1A-203ENST00000472892 CCDC26Q8TAB7 109 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 SCAMP5Q8TAC9 235 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 GAB3Q8WWW8 586 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 FBXO32Q969P5 355 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 CSNK1G1Q9HCP0 422 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 POLR3BQ9NW08 1133 aaPredicted RBP16.22■□□□□ 0.19
VTI1A-203ENST00000472892 SMPD4Q9NXE4 827 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 MAPK8IP1Q9UQF2 711 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 AP1G2O75843 785 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 BEST1O76090 585 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 MBL2P11226 248 aaPredicted RBP16.21■□□□□ 0.19
VTI1A-203ENST00000472892 RPL13P26373 211 aaKnown RBP16.21■□□□□ 0.19
VTI1A-203ENST00000472892 TUBP50607 506 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 SLC5A3P53794 718 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 ATXN1P54253 815 aaKnown RBP16.21■□□□□ 0.19
VTI1A-203ENST00000472892 ADAM9Q13443 819 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 CSRP2Q16527 193 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 HECTD3Q5T447 861 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 CEP68Q76N32 757 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.21■□□□□ 0.19
VTI1A-203ENST00000472892 DDX42Q86XP3 938 aaKnown RBP eCLIP16.21■□□□□ 0.19
VTI1A-203ENST00000472892 ZMIZ2Q8NF64 920 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 RPLP0P6Q8NHW5 317 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 SLC2A14Q8TDB8 520 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 SMOQ99835 787 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 KRT82Q9NSB4 513 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 SEMA4GQ9NTN9 838 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 CFAP97Q9P2B7 532 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 HMGXB4Q9UGU5 601 aa16.21■□□□□ 0.19
VTI1A-203ENST00000472892 E2F8A0AVK6 867 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 K7EQS6 105 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 COCHO43405 550 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 RPP40O75818 363 aaKnown RBP16.2■□□□□ 0.18
VTI1A-203ENST00000472892 CYP17A1P05093 508 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 CCDC130P13994 396 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 PSMC2P35998 433 aaKnown RBP16.2■□□□□ 0.18
VTI1A-203ENST00000472892 PIK3CAP42336 1068 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 GCLMP48507 274 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 PPP3CAQ08209 521 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 INCA1Q0VD86 236 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 ORC1Q13415 861 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 DHCR24Q15392 516 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 ZCWPW2Q504Y3 356 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 RHBDF2Q6PJF5 856 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 CACNA2D4Q7Z3S7 1137 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 C12orf29Q8N999 325 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 TAS1R2Q8TE23 839 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 USP33Q8TEY7 942 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 LOXL4Q96JB6 756 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 ZFRQ96KR1 1074 aaKnown RBP16.2■□□□□ 0.18
VTI1A-203ENST00000472892 CYP3A43Q9HB55 503 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 APOBEC3GQ9HC16 384 aaKnown RBP16.2■□□□□ 0.18
VTI1A-203ENST00000472892 TBC1D14Q9P2M4 693 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 EBF1Q9UH73 591 aa16.2■□□□□ 0.18
VTI1A-203ENST00000472892 A0A0A0MRY4 1105 aa16.19■□□□□ 0.18
VTI1A-203ENST00000472892 TRIM49P0CI25 452 aa16.19■□□□□ 0.18
VTI1A-203ENST00000472892 TRIM49CP0CI26 452 aa16.19■□□□□ 0.18
VTI1A-203ENST00000472892 KRT13P13646 458 aa16.19■□□□□ 0.18
VTI1A-203ENST00000472892 DMC1Q14565 340 aa16.19■□□□□ 0.18
VTI1A-203ENST00000472892 FAM186BQ8IYM0 893 aa16.19■□□□□ 0.18
VTI1A-203ENST00000472892 ACDQ96AP0 544 aa16.19■□□□□ 0.18
VTI1A-203ENST00000472892 ZC3H10Q96K80 434 aaKnown RBP16.19■□□□□ 0.18
VTI1A-203ENST00000472892 HHIPQ96QV1 700 aa16.19■□□□□ 0.18
VTI1A-203ENST00000472892 TWNKQ96RR1 684 aa16.19■□□□□ 0.18
VTI1A-203ENST00000472892 HNRNPABQ99729 332 aaKnown RBP16.19■□□□□ 0.18
VTI1A-203ENST00000472892 DUSP9Q99956 384 aaKnown RBP16.19■□□□□ 0.18
VTI1A-203ENST00000472892 IMPG2Q9BZV3 1241 aa16.19■□□□□ 0.18
VTI1A-203ENST00000472892 FBXO44Q9H4M3 255 aa16.19■□□□□ 0.18
VTI1A-203ENST00000472892 GDPD2Q9HCC8 539 aa16.19■□□□□ 0.18
VTI1A-203ENST00000472892 GMIPQ9P107 970 aa16.19■□□□□ 0.18
VTI1A-203ENST00000472892 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.19■□□□□ 0.18
VTI1A-203ENST00000472892 HELZP42694 1942 aaKnown RBP16.19■□□□□ 0.18
VTI1A-203ENST00000472892 MED19A0JLT2 244 aaPredicted RBP16.18■□□□□ 0.18
VTI1A-203ENST00000472892 SCAMP3O14828 347 aaKnown RBP16.18■□□□□ 0.18
VTI1A-203ENST00000472892 AXIN1O15169 862 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 APBB3O95704 486 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 GTF2H1P32780 548 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 EIF2DP41214 584 aaKnown RBP16.18■□□□□ 0.18
VTI1A-203ENST00000472892 SLC6A11P48066 632 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 PGFP49763 221 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 MAP3K7CLP57077 242 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 EDRF1Q3B7T1 1238 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 KBTBD6Q86V97 674 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 WHAMMQ8TF30 809 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 OTUB2Q96DC9 234 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 CYFIP2Q96F07 1278 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 CCDC34Q96HJ3 373 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 RTKNQ9BST9 563 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 NT5C1AQ9BXI3 368 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 CCSER2Q9H7U1 834 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 TMEM8AQ9HCN3 771 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.18■□□□□ 0.18
VTI1A-203ENST00000472892 FAM49BQ9NUQ9 324 aa16.18■□□□□ 0.18
VTI1A-203ENST00000472892 CDV3Q9UKY7 258 aaKnown RBP16.18■□□□□ 0.18
VTI1A-203ENST00000472892 ATG2BQ96BY7 2078 aa16.17■□□□□ 0.18
VTI1A-203ENST00000472892 FOXD2O60548 495 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms