RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 RAB17Q9H0T7 212 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 EPC1Q9H2F5 836 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 ZWILCHQ9H900 591 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 POPDC2Q9HBU9 364 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 NGRNQ9NPE2 291 aaKnown RBP15.3■□□□□ 0.04
HIF3A-206ENST00000472815 RRN3Q9NYV6 651 aa15.3■□□□□ 0.04
HIF3A-206ENST00000472815 UTP11Q9Y3A2 253 aaKnown RBP15.3■□□□□ 0.04
HIF3A-206ENST00000472815 NLRC5Q86WI3 1866 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 LRRD1A4D1F6 860 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 BEST1O76090 585 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 RALAP11233 206 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 FGFR3P22607 806 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 NOS2P35228 1153 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 FNTAP49354 379 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 CYP1B1Q16678 543 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 CDO1Q16878 200 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 CCDC14Q49A88 953 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 SLC39A12Q504Y0 691 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 AADACL2Q6P093 401 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 VSTM1Q6UX27 236 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 STRADAQ7RTN6 431 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 ADAT2Q7Z6V5 191 aaKnown RBP15.29■□□□□ 0.04
HIF3A-206ENST00000472815 SCML4Q8N228 414 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 C12orf50Q8NA57 414 aaPredicted RBP15.29■□□□□ 0.04
HIF3A-206ENST00000472815 GRK7Q8WTQ7 553 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 FAM172AQ8WUF8 416 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 TEKT4Q8WW24 435 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 MAGOHBQ96A72 148 aaKnown RBP15.29■□□□□ 0.04
HIF3A-206ENST00000472815 CFAP57Q96MR6 1250 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 DDX23Q9BUQ8 820 aaKnown RBP15.29■□□□□ 0.04
HIF3A-206ENST00000472815 TRIM43BA6NCK2 446 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 FAM187AA6NFU0 413 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 CAPN9O14815 690 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 TRIM66O15016 1216 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 RAD51CO43502 376 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 GABBR2O75899 941 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 TRUB2O95900 331 aaKnown RBP15.29■□□□□ 0.04
HIF3A-206ENST00000472815 ZBED1O96006 694 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 CSF2RAP15509 400 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 TNFRSF8P28908 595 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 VSNL1P62760 191 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 ATP11AP98196 1134 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 DR1Q01658 176 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 CCDC142Q17RM4 750 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 SPOUT1Q5T280 376 aaKnown RBP15.29■□□□□ 0.04
HIF3A-206ENST00000472815 SPOCD1Q6ZMY3 1216 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 KCTD6Q8NC69 237 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.29■□□□□ 0.04
HIF3A-206ENST00000472815 RNF25Q96BH1 459 aaPredicted RBP15.29■□□□□ 0.04
HIF3A-206ENST00000472815 TRIM43Q96BQ3 446 aaPredicted RBP15.29■□□□□ 0.04
HIF3A-206ENST00000472815 TTPALQ9BTX7 342 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 LRRC19Q9H756 370 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 MARCH5Q9NX47 278 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 PCSK1NQ9UHG2 260 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 PCYOX1Q9UHG3 505 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 PCDHB5Q9Y5E4 795 aa15.29■□□□□ 0.04
HIF3A-206ENST00000472815 PATJQ8NI35 1801 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 VWA8A3KMH1 1905 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 GRIK1P39086 918 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 CLCN6P51797 869 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 DAOAP59103 153 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 LMNB2Q03252 620 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 ADCY1Q08828 1119 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 PPIGQ13427 754 aaKnown RBP eCLIP15.28■□□□□ 0.04
HIF3A-206ENST00000472815 MRPL58Q14197 206 aaKnown RBP15.28■□□□□ 0.04
HIF3A-206ENST00000472815 PDK2Q15119 407 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 TAF5Q15542 800 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 C15orf59Q2T9L4 293 aaPredicted RBP15.28■□□□□ 0.04
HIF3A-206ENST00000472815 SLC25A52Q3SY17 297 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 SCYL2Q6P3W7 929 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 CCDC137Q6PK04 289 aaKnown RBP15.28■□□□□ 0.04
HIF3A-206ENST00000472815 LRRTM3Q86VH5 581 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 VSIG1Q86XK7 387 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 CCDC105Q8IYK2 499 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 CMTR2Q8IYT2 770 aaKnown RBP15.28■□□□□ 0.04
HIF3A-206ENST00000472815 EIF1ADQ8N9N8 165 aaKnown RBP15.28■□□□□ 0.04
HIF3A-206ENST00000472815 TTC13Q8NBP0 860 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 CLEC4CQ8WTT0 213 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 C2orf15Q8WU43 125 aaKnown RBP15.28■□□□□ 0.04
HIF3A-206ENST00000472815 KHSRPQ92945 711 aaKnown RBP eCLIP15.28■□□□□ 0.04
HIF3A-206ENST00000472815 KCNK16Q96T55 309 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 FRMD8P1Q9BZ68 369 aaPredicted RBP15.28■□□□□ 0.04
HIF3A-206ENST00000472815 ULBP1Q9BZM6 244 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 TMEM51Q9NW97 253 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 AMACRQ9UHK6 382 aa15.28■□□□□ 0.04
HIF3A-206ENST00000472815 MDM4O15151 490 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 CPB1P15086 417 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 TCF4P15884 667 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 KDELR1P24390 212 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 GBP1P32455 592 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 SLC7A5Q01650 507 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 GUCY2DQ02846 1103 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 CUL1Q13616 776 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 SMTNL2Q2TAL5 461 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 USP41Q3LFD5 358 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 DCAF6Q58WW2 860 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 MFSD7Q6UXD7 560 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 ARFGAP1Q8N6T3 406 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 PRELID2Q8N945 189 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 ZMIZ2Q8NF64 920 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms