RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	TRIM49C	P0CI26	452 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	CCDC192	P0DO97	292 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	MBL2	P11226	248 aa	Predicted RBP	9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	CCDC130	P13994	396 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	PSMC2	P35998	433 aa	Known RBP	9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	ASPA	P45381	313 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	TUB	P50607	506 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	NDST1	P52848	882 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	ENPEP	Q07075	957 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	SRSF5	Q13243	272 aa	Known RBP	9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	ORC1	Q13415	861 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	BECN1	Q14457	450 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	NAIF1	Q69YI7	327 aa	Predicted RBP	9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	PKN3	Q6P5Z2	889 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	FILIP1	Q7Z7B0	1213 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	ACOT1	Q86TX2	421 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	UNC93A	Q86WB7	457 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	FAM186B	Q8IYM0	893 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	FUK	Q8N0W3	1084 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	RPLP0P6	Q8NHW5	317 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	SLC2A14	Q8TDB8	520 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	ELMO3	Q96BJ8	720 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	KCNK16	Q96T55	309 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	NACA2	Q9H009	215 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	RNF38	Q9H0F5	515 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	SDCBP2	Q9H190	292 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	LINC00597	Q9H2U6	94 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	GOLPH3L	Q9H4A5	285 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	COMMD8	Q9NX08	183 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	CFAP97	Q9P2B7	532 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	HMGXB4	Q9UGU5	601 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	CDV3	Q9UKY7	258 aa	Known RBP	9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	RALGAPA1	Q6GYQ0	2036 aa		9.46	□□□□□ -0.9
CHEK2-223	ENST00000472807	KIAA1549L	Q6ZVL6	1849 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	MYO16	Q9Y6X6	1858 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	GOLGA6L4	A6NEF3	574 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	TNFRSF10B	O14763	440 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	COCH	O43405	550 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	FOXD2	O60548	495 aa	Predicted RBP	9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	RPP40	O75818	363 aa	Known RBP	9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	APBB3	O95704	486 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	ADH1C	P00326	375 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	CYP17A1	P05093	508 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	FAM200B	P0CF97	657 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	GCLM	P48507	274 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	ZXDB	P98169	803 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	SPEM2	Q0P670	501 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	ADAM9	Q13443	819 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	C1orf220	Q5T0J3	134 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	HECTD3	Q5T447	861 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	SPOPL	Q6IQ16	392 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	SYT13	Q7L8C5	426 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	CRYBG2	Q8N1P7	616 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	CAMKK1	Q8N5S9	505 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	SCAMP5	Q8TAC9	235 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	GAB3	Q8WWW8	586 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	HHIP	Q96QV1	700 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	NIF3L1	Q9GZT8	377 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	FBXO44	Q9H4M3	255 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	CYP3A43	Q9HB55	503 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	GDPD2	Q9HCC8	539 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	FBRSL1	Q9HCM7	1045 aa	Known RBP	9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	TMEM8A	Q9HCN3	771 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	FAM49B	Q9NUQ9	324 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	RMND1	Q9NWS8	449 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	DLL3	Q9NYJ7	618 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	GMIP	Q9P107	970 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	TBC1D14	Q9P2M4	693 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	SH3BP1	Q9Y3L3	701 aa		9.45	□□□□□ -0.9
CHEK2-223	ENST00000472807	CNOT1	A5YKK6	2376 aa	Known RBP	9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	E2F8	A0AVK6	867 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	FAM92A	A1XBS5	289 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	SCAMP3	O14828	347 aa	Known RBP	9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	STX10	O60499	249 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	EPB41	P11171	864 aa	Known RBP	9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	ADH5	P11766	374 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	ADORA2B	P29275	332 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	GTF2H1	P32780	548 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	EIF2D	P41214	584 aa	Known RBP	9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	PXN	P49023	591 aa	Predicted RBP	9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	MXI1	P50539	228 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	SEC13	P55735	322 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	MAP3K7CL	P57077	242 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	INCA1	Q0VD86	236 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	DMC1	Q14565	340 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	DHCR24	Q15392	516 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	EDRF1	Q3B7T1	1238 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	SNX30	Q5VWJ9	437 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	PAQR9	Q6ZVX9	377 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	CACNA2D4	Q7Z3S7	1137 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	FAM160A2	Q8N612	972 aa	Predicted RBP	9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	C12orf29	Q8N999	325 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	TAS1R2	Q8TE23	839 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	OTUB2	Q96DC9	234 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	SMO	Q99835	787 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	NT5C1A	Q9BXI3	368 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	CCSER2	Q9H7U1	834 aa		9.44	□□□□□ -0.9
CHEK2-223	ENST00000472807	MMRN2	Q9H8L6	949 aa		9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms