RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 TADA2BQ86TJ2 420 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 ZC3H3Q8IXZ2 948 aaKnown RBP20.55■□□□□ 0.88
COMMD1-208ENST00000472729 MAML2Q8IZL2 1156 aaPredicted RBP20.55■□□□□ 0.88
COMMD1-208ENST00000472729 TWNKQ96RR1 684 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 RNF38Q9H0F5 515 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 GMIPQ9P107 970 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 CFAP97Q9P2B7 532 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 TBC1D14Q9P2M4 693 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 TNFRSF10BO14763 440 aa20.54■□□□□ 0.88
COMMD1-208ENST00000472729 OAS1P00973 400 aaKnown RBP20.54■□□□□ 0.88
COMMD1-208ENST00000472729 CD44P16070 742 aaKnown RBP20.54■□□□□ 0.88
COMMD1-208ENST00000472729 TUBP50607 506 aa20.54■□□□□ 0.88
COMMD1-208ENST00000472729 LRMPQ12912 555 aa20.54■□□□□ 0.88
COMMD1-208ENST00000472729 CUL2Q13617 745 aa20.54■□□□□ 0.88
COMMD1-208ENST00000472729 CREBRFQ8IUR6 639 aa20.54■□□□□ 0.88
COMMD1-208ENST00000472729 ZNF687Q8N1G0 1237 aa20.54■□□□□ 0.88
COMMD1-208ENST00000472729 KIAA1958Q8N8K9 716 aa20.54■□□□□ 0.88
COMMD1-208ENST00000472729 SECISBP2LQ93073 1101 aaKnown RBP20.54■□□□□ 0.88
COMMD1-208ENST00000472729 TATDN2Q93075 761 aa20.54■□□□□ 0.88
COMMD1-208ENST00000472729 SLC35C1Q96A29 364 aa20.54■□□□□ 0.88
COMMD1-208ENST00000472729 PNPLA8Q9NP80 782 aa20.54■□□□□ 0.88
COMMD1-208ENST00000472729 PRMT8Q9NR22 394 aaPredicted RBP20.54■□□□□ 0.88
COMMD1-208ENST00000472729 PPP1R3GB7ZBB8 358 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 TRDMT1O14717 391 aaKnown RBP20.53■□□□□ 0.88
COMMD1-208ENST00000472729 COCHO43405 550 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 BEST1O76090 585 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 CCDC192P0DO97 292 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 GJA4P35212 333 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 GALK1P51570 392 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 STX17P56962 302 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 EML3Q32P44 896 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 FBXO43Q4G163 708 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 FOXR2Q6PJQ5 311 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 CLEC20AQ6ZU45 233 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 CD101Q93033 1021 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 NT5C1BQ96P26 610 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 DUSP16Q9BY84 665 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 LINC00597Q9H2U6 94 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 KIAA1468Q9P260 1216 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 HESX1Q9UBX0 185 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 RAB23Q9ULC3 237 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 COQ4Q9Y3A0 265 aa20.53■□□□□ 0.88
COMMD1-208ENST00000472729 OTOL1A6NHN0 477 aaPredicted RBP20.52■□□□□ 0.88
COMMD1-208ENST00000472729 OLFM2O95897 454 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 ADH1CP00326 375 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 CD19P15391 556 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 ATP5C1P36542 298 aaKnown RBP20.52■□□□□ 0.88
COMMD1-208ENST00000472729 FMO5P49326 533 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 CCINQ13939 588 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 TMEM196Q5HYL7 178 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 PPP1R26Q5T8A7 1209 aaPredicted RBP20.52■□□□□ 0.88
COMMD1-208ENST00000472729 SNX30Q5VWJ9 437 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 TTI2Q6NXR4 508 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 ZMIZ2Q8NF64 920 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 RIN3Q8TB24 985 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 WHAMMQ8TF30 809 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 CCSER2Q9H7U1 834 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 IL37Q9NZH6 218 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 SLC8A2Q9UPR5 921 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 SCML2Q9UQR0 700 aa20.52■□□□□ 0.88
COMMD1-208ENST00000472729 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.52■□□□□ 0.88
COMMD1-208ENST00000472729 E2F8A0AVK6 867 aa20.51■□□□□ 0.87
COMMD1-208ENST00000472729 P4HA2O15460 535 aa20.51■□□□□ 0.87
COMMD1-208ENST00000472729 TLR5O60602 858 aa20.51■□□□□ 0.87
COMMD1-208ENST00000472729 RALAP11233 206 aa20.51■□□□□ 0.87
COMMD1-208ENST00000472729 PSEN1P49768 467 aa20.51■□□□□ 0.87
COMMD1-208ENST00000472729 SATB1Q01826 763 aa20.51■□□□□ 0.87
COMMD1-208ENST00000472729 TPD52L1Q16890 204 aaPredicted RBP20.51■□□□□ 0.87
COMMD1-208ENST00000472729 BTBD8Q5XKL5 378 aa20.51■□□□□ 0.87
COMMD1-208ENST00000472729 Q6ZS52 159 aa20.51■□□□□ 0.87
COMMD1-208ENST00000472729 CDK5RAP1Q96SZ6 601 aaKnown RBP20.51■□□□□ 0.87
COMMD1-208ENST00000472729 ARID3AQ99856 593 aa20.51■□□□□ 0.87
COMMD1-208ENST00000472729 DUSP9Q99956 384 aaKnown RBP20.51■□□□□ 0.87
COMMD1-208ENST00000472729 SRRTQ9BXP5 876 aaKnown RBP20.51■□□□□ 0.87
COMMD1-208ENST00000472729 NAGPAQ9UK23 515 aa20.51■□□□□ 0.87
COMMD1-208ENST00000472729 LSM7Q9UK45 103 aaKnown RBP20.51■□□□□ 0.87
COMMD1-208ENST00000472729 FAM92AA1XBS5 289 aa20.5■□□□□ 0.87
COMMD1-208ENST00000472729 BMP6P22004 513 aa20.5■□□□□ 0.87
COMMD1-208ENST00000472729 RAD23BP54727 409 aa20.5■□□□□ 0.87
COMMD1-208ENST00000472729 SGO2Q562F6 1265 aa20.5■□□□□ 0.87
COMMD1-208ENST00000472729 ARHGAP18Q8N392 663 aa20.5■□□□□ 0.87
COMMD1-208ENST00000472729 PPM1KQ8N3J5 372 aa20.5■□□□□ 0.87
COMMD1-208ENST00000472729 SLC4A11Q8NBS3 891 aa20.5■□□□□ 0.87
COMMD1-208ENST00000472729 OTUB2Q96DC9 234 aa20.5■□□□□ 0.87
COMMD1-208ENST00000472729 CHFRQ96EP1 664 aa20.5■□□□□ 0.87
COMMD1-208ENST00000472729 KIAA1257Q9ULG3 409 aa20.5■□□□□ 0.87
COMMD1-208ENST00000472729 COL4A3Q01955 1670 aa20.49■□□□□ 0.87
COMMD1-208ENST00000472729 SCAMP3O14828 347 aaKnown RBP20.49■□□□□ 0.87
COMMD1-208ENST00000472729 CYP26A1O43174 497 aa20.49■□□□□ 0.87
COMMD1-208ENST00000472729 ZDHHC11BP0C7U3 371 aa20.49■□□□□ 0.87
COMMD1-208ENST00000472729 IRF1P10914 325 aa20.49■□□□□ 0.87
COMMD1-208ENST00000472729 PREPLQ4J6C6 727 aaPredicted RBP20.49■□□□□ 0.87
COMMD1-208ENST00000472729 C10orf120Q5SQS8 335 aa20.49■□□□□ 0.87
COMMD1-208ENST00000472729 FSTL4Q6MZW2 842 aa20.49■□□□□ 0.87
COMMD1-208ENST00000472729 ADGRG2Q8IZP9 1017 aa20.49■□□□□ 0.87
COMMD1-208ENST00000472729 ANKRD52Q8NB46 1076 aa20.49■□□□□ 0.87
COMMD1-208ENST00000472729 ZBTB44Q8NCP5 570 aa20.49■□□□□ 0.87
COMMD1-208ENST00000472729 RUBCNQ92622 972 aa20.49■□□□□ 0.87
COMMD1-208ENST00000472729 NCDNQ9UBB6 729 aa20.49■□□□□ 0.87
COMMD1-208ENST00000472729 RWDD2AQ9UIY3 292 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms