RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TNFRSF10DQ9UBN6 386 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 TMEM59LQ9UK28 342 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 CNTN6Q9UQ52 1028 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 LRRC9Q6ZRR7 1453 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 FITM1A5D6W6 292 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 FAM171A2A8MVW0 826 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 UBE2CO00762 179 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 KCNQ3O43525 872 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 DKC1O60832 514 aaKnown RBP eCLIP2.95□□□□□ -1.94
XRN1-210ENST00000472697 AGFG2O95081 481 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 ARIH2O95376 493 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 C8BP07358 591 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 ANXA6P08133 673 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 ZNF888P0CJ79 500 aaPredicted RBP2.95□□□□□ -1.94
XRN1-210ENST00000472697 CSH1P0DML2 217 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 CSH2P0DML3 217 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 UBL4AP11441 157 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 TGM1P22735 817 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 ADORA2AP29274 412 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 COPAP53621 1224 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 HSPA2P54652 639 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 RPP30P78346 268 aaKnown RBP2.95□□□□□ -1.94
XRN1-210ENST00000472697 IKZF1Q13422 519 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 RAB39AQ14964 217 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 CHRNA2Q15822 529 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 ADCK5Q3MIX3 580 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 CYP27C1Q4G0S4 372 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 TBC1D10BQ4KMP7 808 aaPredicted RBP2.95□□□□□ -1.94
XRN1-210ENST00000472697 ADGRF1Q5T601 910 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 THEMIS2Q5TEJ8 643 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 GRAMD4Q6IC98 578 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 TMEM132EQ6IEE7 984 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 TTI2Q6NXR4 508 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 ISLR2Q6UXK2 745 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 PIK3AP1Q6ZUJ8 805 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 BMP8AQ7Z5Y6 402 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 TTC30AQ86WT1 665 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 RHOT2Q8IXI1 618 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 DIS3L2Q8IYB7 885 aaKnown RBP2.95□□□□□ -1.94
XRN1-210ENST00000472697 CCDC170Q8IYT3 715 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 FRMD1Q8N878 549 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 SLC17A8Q8NDX2 589 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 ADAMTS15Q8TE58 950 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 VPS33AQ96AX1 596 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 PHACTR3Q96KR7 559 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 NOX5Q96PH1 765 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 MRI1Q9BV20 369 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 SCNM1Q9BWG6 230 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 YIPF2Q9BWQ6 316 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 GLIS2Q9BZE0 524 aaPredicted RBP2.95□□□□□ -1.94
XRN1-210ENST00000472697 CLPBQ9H078 707 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 WNT8AQ9H1J5 351 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 JMJD4Q9H9V9 463 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 A1CFQ9NQ94 594 aaKnown RBP2.95□□□□□ -1.94
XRN1-210ENST00000472697 EIF2B3Q9NR50 452 aaKnown RBP2.95□□□□□ -1.94
XRN1-210ENST00000472697 HERC5Q9UII4 1024 aaKnown RBP2.95□□□□□ -1.94
XRN1-210ENST00000472697 RAB21Q9UL25 225 aa2.95□□□□□ -1.94
XRN1-210ENST00000472697 AATKQ6ZMQ8 1374 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 NHSL1Q5SYE7 1610 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 HECW1Q76N89 1606 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 PEX12O00623 359 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 TNPO2O14787 897 aaKnown RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 ZSCAN9O15535 394 aaPredicted RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 SRGAP2O75044 1071 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 ENTPD3O75355 529 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 PSMD10O75832 226 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 F9P00740 461 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 TGFB1P01137 390 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 ITGB1P05556 798 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 ACP5P13686 325 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 RPS6KB1P23443 525 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 EPHA8P29322 1005 aaPredicted RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 SERPINA4P29622 427 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 TM4SF1P30408 202 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 RBM5P52756 815 aaKnown RBP eCLIP2.94□□□□□ -1.94
XRN1-210ENST00000472697 HSD17B7P56937 341 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 ACTR2P61160 394 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 ZP2Q05996 745 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 WASHC5Q12768 1159 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 SMAD4Q13485 552 aaKnown RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 CUL4AQ13619 759 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 FBXO43Q4G163 708 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 ZNF667Q5HYK9 610 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 EMC10Q5UCC4 262 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 CAVIN1Q6NZI2 390 aaKnown RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 TMTC3Q6ZXV5 915 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 DCP2Q8IU60 420 aaKnown RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.94□□□□□ -1.94
XRN1-210ENST00000472697 DTX3Q8N9I9 347 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 LILRB1Q8NHL6 650 aaPredicted RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 GABPB2Q8TAK5 448 aaPredicted RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 IGDCC4Q8TDY8 1250 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 SH3RF3Q8TEJ3 882 aaPredicted RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 HMGB4Q8WW32 186 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 SEPT1Q8WYJ6 367 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 TBC1D31Q96DN5 1066 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 COX4I2Q96KJ9 171 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 RPL10LQ96L21 214 aaKnown RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 SNX27Q96L92 541 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 SLC46A1Q96NT5 459 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms