RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 CPP00450 1065 aa15.71■□□□□ 0.11
UBXN11-213ENST00000472155 ACTN3Q08043 901 aaPredicted RBP15.71■□□□□ 0.11
UBXN11-213ENST00000472155 GPR162Q16538 588 aa15.71■□□□□ 0.11
UBXN11-213ENST00000472155 BBS9Q3SYG4 887 aa15.71■□□□□ 0.11
UBXN11-213ENST00000472155 C9orf57Q5W0N0 161 aa15.71■□□□□ 0.11
UBXN11-213ENST00000472155 TRABD2AQ86V40 505 aa15.71■□□□□ 0.11
UBXN11-213ENST00000472155 ZNF410Q86VK4 478 aa15.71■□□□□ 0.11
UBXN11-213ENST00000472155 SPATS2Q86XZ4 545 aaKnown RBP15.71■□□□□ 0.11
UBXN11-213ENST00000472155 FBXO36Q8NEA4 188 aa15.71■□□□□ 0.11
UBXN11-213ENST00000472155 KLF6Q99612 283 aaPredicted RBP15.71■□□□□ 0.11
UBXN11-213ENST00000472155 SHOC2Q9UQ13 582 aa15.71■□□□□ 0.11
UBXN11-213ENST00000472155 GNEQ9Y223 722 aaKnown RBP15.71■□□□□ 0.11
UBXN11-213ENST00000472155 A8MXQ7 604 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 DARSP14868 501 aaKnown RBP15.7■□□□□ 0.1
UBXN11-213ENST00000472155 HDAC4P56524 1084 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 PPP6R3Q5H9R7 873 aaPredicted RBP15.7■□□□□ 0.1
UBXN11-213ENST00000472155 DARS2Q6PI48 645 aaKnown RBP15.7■□□□□ 0.1
UBXN11-213ENST00000472155 ALKAL1Q6UXT8 129 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 FAM47EQ6ZV65 393 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 CENPUQ71F23 418 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 PPIL6Q8IXY8 311 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 PLD5Q8N7P1 536 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 PCDH19Q8TAB3 1148 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 CKAP2Q8WWK9 683 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 TRIM56Q9BRZ2 755 aaKnown RBP15.7■□□□□ 0.1
UBXN11-213ENST00000472155 SNRNP25Q9BV90 132 aaKnown RBP15.7■□□□□ 0.1
UBXN11-213ENST00000472155 MAK16Q9BXY0 300 aaKnown RBP15.7■□□□□ 0.1
UBXN11-213ENST00000472155 GCOM2Q9BZD3 368 aaPredicted RBP15.7■□□□□ 0.1
UBXN11-213ENST00000472155 TMPRSS4Q9NRS4 437 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 XPO7Q9UIA9 1087 aaKnown RBP15.7■□□□□ 0.1
UBXN11-213ENST00000472155 GGA2Q9UJY4 613 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 PRPSAP2O60256 369 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 F2P00734 622 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 ABHD2P08910 425 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 LCP1P13796 627 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 TLK2Q86UE8 772 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 CCHCR1Q8TD31 782 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 TRIM6Q9C030 488 aaPredicted RBP15.7■□□□□ 0.1
UBXN11-213ENST00000472155 RABGEF1Q9UJ41 708 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 CHMP2BQ9UQN3 213 aa15.7■□□□□ 0.1
UBXN11-213ENST00000472155 SMIM28A0A1B0GU29 152 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 A6NJR5 290 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 GOLGA8RI6L899 631 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 MCF2LO15068 1137 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 SNX3O60493 162 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 TKTP29401 623 aaKnown RBP15.69■□□□□ 0.1
UBXN11-213ENST00000472155 RPA3P35244 121 aaPredicted RBP15.69■□□□□ 0.1
UBXN11-213ENST00000472155 PCK1P35558 622 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 SCTRP47872 440 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 AFF1P51825 1210 aaKnown RBP15.69■□□□□ 0.1
UBXN11-213ENST00000472155 FAM110CQ1W6H9 321 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 IQSEC1Q6DN90 963 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 FBF1Q8TES7 1133 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 GTF3C2Q8WUA4 911 aaPredicted RBP15.69■□□□□ 0.1
UBXN11-213ENST00000472155 RNF157Q96PX1 679 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 TGS1Q96RS0 853 aaKnown RBP15.69■□□□□ 0.1
UBXN11-213ENST00000472155 SLC4A5Q9BY07 1137 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 PCDH18Q9HCL0 1135 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 EFR3BQ9Y2G0 817 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 ZNF638Q14966 1978 aaKnown RBP15.69■□□□□ 0.1
UBXN11-213ENST00000472155 MYO18AQ92614 2054 aaKnown RBP15.69■□□□□ 0.1
UBXN11-213ENST00000472155 F5H423 210 aaPredicted RBP15.69■□□□□ 0.1
UBXN11-213ENST00000472155 H7C0C1 242 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 IGF2BP3O00425 579 aaKnown RBP eCLIP15.69■□□□□ 0.1
UBXN11-213ENST00000472155 KRT15P19012 456 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 STX2P32856 288 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 ATP5OP48047 213 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 PITX1P78337 314 aaPredicted RBP15.69■□□□□ 0.1
UBXN11-213ENST00000472155 SNX17Q15036 470 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 NOMO1Q15155 1222 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 SLC1A5Q15758 541 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 DCAF4L1Q3SXM0 396 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 FAM133BQ5BKY9 247 aaKnown RBP15.69■□□□□ 0.1
UBXN11-213ENST00000472155 C3orf62Q6ZUJ4 267 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 PYROXD2Q8N2H3 581 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 PYROXD1Q8WU10 500 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 USP29Q9HBJ7 922 aa15.69■□□□□ 0.1
UBXN11-213ENST00000472155 IQCA1LA6NCM1 817 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 CCT8L1PA6NM43 557 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 H0YHG0 523 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 STAU1O95793 577 aaKnown RBP15.68■□□□□ 0.1
UBXN11-213ENST00000472155 RBL1P28749 1068 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 SLC6A3Q01959 620 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 KRT81Q14533 505 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 MFSD10Q14728 455 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 UBXN11Q5T124 520 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 NOTUMQ6P988 496 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 TMEM110Q86TL2 294 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 PNMA8AQ86V59 439 aaPredicted RBP15.68■□□□□ 0.1
UBXN11-213ENST00000472155 P3H4Q92791 437 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 FAXDC2Q96IV6 333 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 ZFP42Q96MM3 310 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 CCDC77Q9BR77 488 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 TRABDQ9H4I3 376 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 RSAD1Q9HA92 442 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 SLCO1B3Q9NPD5 702 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 HAUS2Q9NVX0 235 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 SLC45A1Q9Y2W3 748 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 CLDN5O00501 218 aa15.68■□□□□ 0.1
UBXN11-213ENST00000472155 OAS1P00973 400 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms