RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CUL5Q93034 780 aa5.76□□□□□ -1.49
CD46-213ENST00000471987 SPSB4Q96A44 273 aa5.76□□□□□ -1.49
CD46-213ENST00000471987 B3GNT5Q9BYG0 378 aa5.76□□□□□ -1.49
CD46-213ENST00000471987 TRIM5Q9C035 493 aa5.76□□□□□ -1.49
CD46-213ENST00000471987 ATP6V0A4Q9HBG4 840 aa5.76□□□□□ -1.49
CD46-213ENST00000471987 SNX15Q9NRS6 342 aa5.76□□□□□ -1.49
CD46-213ENST00000471987 AFG3L2Q9Y4W6 797 aa5.76□□□□□ -1.49
CD46-213ENST00000471987 TRIM38O00635 465 aa5.75□□□□□ -1.49
CD46-213ENST00000471987 SRGAP2O75044 1071 aa5.75□□□□□ -1.49
CD46-213ENST00000471987 RNF8O76064 485 aa5.75□□□□□ -1.49
CD46-213ENST00000471987 NTN1O95631 604 aa5.75□□□□□ -1.49
CD46-213ENST00000471987 EPHB1P54762 984 aa5.75□□□□□ -1.49
CD46-213ENST00000471987 GHRHRQ02643 423 aa5.75□□□□□ -1.49
CD46-213ENST00000471987 LMAN2Q12907 356 aa5.75□□□□□ -1.49
CD46-213ENST00000471987 FHL1Q13642 323 aa5.75□□□□□ -1.49
CD46-213ENST00000471987 ZNF398Q8TD17 642 aa5.75□□□□□ -1.49
CD46-213ENST00000471987 STAG1Q8WVM7 1258 aa5.75□□□□□ -1.49
CD46-213ENST00000471987 COQ8BQ96D53 544 aa5.75□□□□□ -1.49
CD46-213ENST00000471987 WACQ9BTA9 647 aa5.75□□□□□ -1.49
CD46-213ENST00000471987 VN1R3Q9BXE9 311 aa5.75□□□□□ -1.49
CD46-213ENST00000471987 LOC102723971A0A1B0GUV8 181 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 CAPN8A6NHC0 703 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 TBX3O15119 743 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 CCP110O43303 1012 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 RGS10O43665 173 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 CTNND1O60716 968 aaKnown RBP5.74□□□□□ -1.49
CD46-213ENST00000471987 RASAL1O95294 804 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 U2AF1L5P0DN76 240 aaPredicted RBP5.74□□□□□ -1.49
CD46-213ENST00000471987 UQCRC1P31930 480 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 COPB1P53618 953 aaKnown RBP5.74□□□□□ -1.49
CD46-213ENST00000471987 FOXG1P55316 489 aaPredicted RBP5.74□□□□□ -1.49
CD46-213ENST00000471987 KRTAP10-9P60411 292 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 IGBP1P78318 339 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 U2AF1Q01081 240 aaKnown RBP eCLIP5.74□□□□□ -1.491e-20■■■■■ 29.3
CD46-213ENST00000471987 ZNF260Q3ZCT1 412 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 CACHD1Q5VU97 1274 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 TMEM65Q6PI78 240 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 SHC4Q6S5L8 630 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 ZDHHC24Q6UX98 284 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 OVCH2Q7RTZ1 564 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 OR56A3Q8NH54 315 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 C16orf52Q8NHV5 167 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 MAML1Q92585 1016 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 KRTAP1-5Q9BYS1 174 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 TRIM36Q9NQ86 728 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 ZIM2Q9NZV7 527 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 PI4KBQ9UBF8 816 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 FER1L4A9Z1Z3 1794 aa5.74□□□□□ -1.49
CD46-213ENST00000471987 MBD3L4A6NDZ8 208 aaPredicted RBP5.73□□□□□ -1.49
CD46-213ENST00000471987 MBD3L3A6NE82 208 aaPredicted RBP5.73□□□□□ -1.49
CD46-213ENST00000471987 MYMKA6NI61 221 aa5.73□□□□□ -1.49
CD46-213ENST00000471987 TMPRSS11DO60235 418 aa5.73□□□□□ -1.49
CD46-213ENST00000471987 MYBP10242 640 aa5.73□□□□□ -1.49
CD46-213ENST00000471987 CREB1P16220 341 aa5.73□□□□□ -1.49
CD46-213ENST00000471987 HOXB6P17509 224 aaKnown RBP5.73□□□□□ -1.49
CD46-213ENST00000471987 TIRAPP58753 221 aa5.73□□□□□ -1.49
CD46-213ENST00000471987 LRRC41Q15345 812 aa5.73□□□□□ -1.49
CD46-213ENST00000471987 OSR1Q8TAX0 266 aaPredicted RBP5.73□□□□□ -1.49
CD46-213ENST00000471987 PNISRQ8TF01 805 aaKnown RBP5.73□□□□□ -1.49
CD46-213ENST00000471987 CTHRC1Q96CG8 243 aa5.73□□□□□ -1.49
CD46-213ENST00000471987 TMEM60Q9H2L4 133 aa5.73□□□□□ -1.49
CD46-213ENST00000471987 DNMT3BQ9UBC3 853 aaKnown RBP5.73□□□□□ -1.49
CD46-213ENST00000471987 LPAR3Q9UBY5 353 aa5.73□□□□□ -1.49
CD46-213ENST00000471987 TRIM43BA6NCK2 446 aa5.72□□□□□ -1.49
CD46-213ENST00000471987 FAM227AF5H4B4 570 aa5.72□□□□□ -1.49
CD46-213ENST00000471987 PYCARD-AS1I3L0S3 204 aa5.72□□□□□ -1.49
CD46-213ENST00000471987 CD3EAPO15446 510 aaKnown RBP5.72□□□□□ -1.49
CD46-213ENST00000471987 INSIG1O15503 277 aa5.72□□□□□ -1.49
CD46-213ENST00000471987 TMEM191BP0C7N4 346 aa5.72□□□□□ -1.49
CD46-213ENST00000471987 APEHP13798 732 aaKnown RBP5.72□□□□□ -1.49
CD46-213ENST00000471987 KLRC1P26715 233 aa5.72□□□□□ -1.49
CD46-213ENST00000471987 DIO1P49895 249 aa5.72□□□□□ -1.49
CD46-213ENST00000471987 TIAL1Q01085 375 aaKnown RBP eCLIP5.72□□□□□ -1.49
CD46-213ENST00000471987 LARS2Q15031 903 aaKnown RBP5.72□□□□□ -1.49
CD46-213ENST00000471987 ZNF517Q6ZMY9 492 aaPredicted RBP5.72□□□□□ -1.49
CD46-213ENST00000471987 MICU3Q86XE3 530 aa5.72□□□□□ -1.49
CD46-213ENST00000471987 COL23A1Q86Y22 540 aaPredicted RBP5.72□□□□□ -1.49
CD46-213ENST00000471987 LINC01465Q8N7H1 131 aa5.72□□□□□ -1.49
CD46-213ENST00000471987 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.72□□□□□ -1.49
CD46-213ENST00000471987 TRIM43Q96BQ3 446 aaPredicted RBP5.72□□□□□ -1.49
CD46-213ENST00000471987 MGAT4CQ9UBM8 478 aa5.72□□□□□ -1.49
CD46-213ENST00000471987 ISM1B1AKI9 464 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 SPRY2O43597 315 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 RASSF9O75901 435 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 SUMO3P55854 103 aaPredicted RBP5.71□□□□□ -1.5
CD46-213ENST00000471987 RBMS2Q15434 407 aaKnown RBP5.71□□□□□ -1.5
CD46-213ENST00000471987 TWIST1Q15672 202 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 C10orf25Q5T742 122 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 ANO7Q6IWH7 933 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 CXorf57Q6NSI4 855 aaKnown RBP5.71□□□□□ -1.5
CD46-213ENST00000471987 DCDC5Q6ZRR9 648 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 KIAA0319LQ8IZA0 1049 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 NRACQ8N912 160 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 NGDNQ8NEJ9 315 aaKnown RBP5.71□□□□□ -1.5
CD46-213ENST00000471987 RUNDC1Q96C34 613 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 NMD3Q96D46 503 aaKnown RBP5.71□□□□□ -1.5
CD46-213ENST00000471987 HS6ST2Q96MM7 605 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 C22orf23Q9BZE7 217 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 SACM1LQ9NTJ5 587 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 GAR1Q9NY12 217 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms