RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 GRSF1Q12849 480 aaKnown RBP eCLIP12.21□□□□□ -0.45
COL4A3-205ENST00000471862 IFRD2Q12894 506 aaPredicted RBP12.21□□□□□ -0.45
COL4A3-205ENST00000471862 ELOA2Q8IYF1 753 aaPredicted RBP12.21□□□□□ -0.45
COL4A3-205ENST00000471862 SEMA4DQ92854 862 aa12.21□□□□□ -0.45
COL4A3-205ENST00000471862 ERCC4Q92889 916 aaPredicted RBP12.21□□□□□ -0.45
COL4A3-205ENST00000471862 HNRNPABQ99729 332 aaKnown RBP12.21□□□□□ -0.45
COL4A3-205ENST00000471862 P2RY13Q9BPV8 354 aa12.21□□□□□ -0.45
COL4A3-205ENST00000471862 IMPG2Q9BZV3 1241 aa12.21□□□□□ -0.45
COL4A3-205ENST00000471862 MMRN2Q9H8L6 949 aa12.21□□□□□ -0.45
COL4A3-205ENST00000471862 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.21□□□□□ -0.45
COL4A3-205ENST00000471862 FAM49BQ9NUQ9 324 aa12.21□□□□□ -0.45
COL4A3-205ENST00000471862 SPAG17Q6Q759 2223 aa12.21□□□□□ -0.46
COL4A3-205ENST00000471862 SLC16A3O15427 465 aaKnown RBP12.2□□□□□ -0.46
COL4A3-205ENST00000471862 COCHO43405 550 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 RNF40O75150 1001 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 NFATC1O95644 943 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 ABL1P00519 1130 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 CYP17A1P05093 508 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 EPB41P11171 864 aaKnown RBP12.2□□□□□ -0.46
COL4A3-205ENST00000471862 OPRD1P41143 372 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 FNTBP49356 437 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 MXI1P50539 228 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 TUBP50607 506 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 MAP3K7CLP57077 242 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 FBXO43Q4G163 708 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 ANKRD40Q6AI12 368 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 CLEC20AQ6ZU45 233 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 GPRIN1Q7Z2K8 1008 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 FILIP1Q7Z7B0 1213 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 LONP2Q86WA8 852 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 TTC16Q8NEE8 873 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 CD101Q93033 1021 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 SMARCE1Q969G3 411 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 DUSP9Q99956 384 aaKnown RBP12.2□□□□□ -0.46
COL4A3-205ENST00000471862 NT5C1AQ9BXI3 368 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 PNPLA8Q9NP80 782 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 SMPD4Q9NXE4 827 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 GMIPQ9P107 970 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 CHORDC1Q9UHD1 332 aaPredicted RBP12.2□□□□□ -0.46
COL4A3-205ENST00000471862 COQ4Q9Y3A0 265 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 CEP250Q9BV73 2442 aa12.2□□□□□ -0.46
COL4A3-205ENST00000471862 TRIM49BA6NDI0 452 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 HRO43593 1189 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 SMC2O95347 1197 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 FAM200BP0CF97 657 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 MBL2P11226 248 aaPredicted RBP12.19□□□□□ -0.46
COL4A3-205ENST00000471862 ADORA2BP29275 332 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 CNR2P34972 360 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 PGFP49763 221 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 FKBP3Q00688 224 aaKnown RBP12.19□□□□□ -0.46
COL4A3-205ENST00000471862 LRRC63Q05C16 580 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 NR1H3Q13133 447 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 CBWD6Q4V339 395 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 CBWD3Q5JTY5 395 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 CBWD5Q5RIA9 395 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 HECTD3Q5T447 861 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 WDR5BQ86VZ2 330 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 DDX42Q86XP3 938 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL4A3-205ENST00000471862 KIAA2013Q8IYS2 634 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 ADGRG2Q8IZP9 1017 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 FBXL13Q8NEE6 735 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 EXOC4Q96A65 974 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 CYFIP2Q96F07 1278 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 GTPBP4Q9BZE4 634 aaKnown RBP12.19□□□□□ -0.46
COL4A3-205ENST00000471862 FAM124BQ9H5Z6 455 aaPredicted RBP12.19□□□□□ -0.46
COL4A3-205ENST00000471862 CCSER2Q9H7U1 834 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 RAB20Q9NX57 234 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 CFAP97Q9P2B7 532 aa12.19□□□□□ -0.46
COL4A3-205ENST00000471862 CCDC163A0A0D9SF12 145 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 E2F8A0AVK6 867 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 SLC9A3R1O14745 358 aaPredicted RBP12.18□□□□□ -0.46
COL4A3-205ENST00000471862 STX10O60499 249 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 ATG13O75143 517 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 CHRM1P11229 460 aaPredicted RBP12.18□□□□□ -0.46
COL4A3-205ENST00000471862 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
COL4A3-205ENST00000471862 CD58P19256 250 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 TGM1P22735 817 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 SRSF5Q13243 272 aaKnown RBP12.18□□□□□ -0.46
COL4A3-205ENST00000471862 DHCR24Q15392 516 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 PPP1R26Q5T8A7 1209 aaPredicted RBP12.18□□□□□ -0.46
COL4A3-205ENST00000471862 WBP2Q969T9 261 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 TSG101Q99816 390 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 ARID3AQ99856 593 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 HINFPQ9BQA5 517 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 FBXO44Q9H4M3 255 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 NCDNQ9UBB6 729 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 MAN1B1Q9UKM7 699 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 SCML2Q9UQR0 700 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 MYO18AQ92614 2054 aaKnown RBP12.18□□□□□ -0.46
COL4A3-205ENST00000471862 RALGAPA1Q6GYQ0 2036 aa12.18□□□□□ -0.46
COL4A3-205ENST00000471862 DNAH14Q0VDD8 3507 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 K7EQS6 105 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 SCAMP3O14828 347 aaKnown RBP12.17□□□□□ -0.46
COL4A3-205ENST00000471862 GREM1O60565 184 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 TLR5O60602 858 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 GADD45BO75293 160 aaPredicted RBP12.17□□□□□ -0.46
COL4A3-205ENST00000471862 TRIM21P19474 475 aaKnown RBP12.17□□□□□ -0.46
COL4A3-205ENST00000471862 BMP6P22004 513 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 EIF2DP41214 584 aaKnown RBP12.17□□□□□ -0.46
COL4A3-205ENST00000471862 ID4P47928 161 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms