RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 EEF1DP29692 281 aaKnown RBP8.89□□□□□ -0.99
CD47-204ENST00000471694 CAV1Q03135 178 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 PDIA5Q14554 519 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 NAPEPLDQ6IQ20 393 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 SLC27A1Q6PCB7 646 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 PSRC1Q6PGN9 363 aaPredicted RBP8.89□□□□□ -0.99
CD47-204ENST00000471694 TFAP2DQ7Z6R9 452 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 TRAPPC5Q8IUR0 188 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 C1orf54Q8WWF1 131 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 TMEM159Q96B96 161 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 CCDC90BQ9GZT6 254 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 TAF1DQ9H5J8 278 aaPredicted RBP8.89□□□□□ -0.99
CD47-204ENST00000471694 ARMC7Q9H6L4 198 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 TASP1Q9H6P5 420 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 MRFAP1Q9Y605 127 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 BCL2L1Q07817 233 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 TRIM32Q13049 653 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 CTU1Q7Z7A3 348 aaKnown RBP8.89□□□□□ -0.99
CD47-204ENST00000471694 ZNF410Q86VK4 478 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 ATP8B4Q8TF62 1192 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 FAM162AQ96A26 154 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 IDI2Q9BXS1 227 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 N6AMT1Q9Y5N5 214 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 QRICH2Q9H0J4 1663 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 GSAPA4D1B5 854 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 MTSS1O43312 755 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 SLC1A1P43005 524 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 PRIM2P49643 509 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 ERVK-21P61565 698 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 ESRRGP62508 458 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 RAET1GQ6H3X3 334 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 NUP93Q8N1F7 819 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 SAMD3Q8N6K7 520 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 CEP70Q8NHQ1 597 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 APBB2Q92870 758 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 MCCC1Q96RQ3 725 aaPredicted RBP8.89□□□□□ -0.99
CD47-204ENST00000471694 TCF25Q9BQ70 676 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 TUBB6Q9BUF5 446 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 SMYD3Q9H7B4 428 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 AGO4Q9HCK5 861 aaKnown RBP8.89□□□□□ -0.99
CD47-204ENST00000471694 RAB6BQ9NRW1 208 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 ABI3Q9P2A4 366 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 SCAMP3O14828 347 aaKnown RBP8.89□□□□□ -0.99
CD47-204ENST00000471694 SOAT2O75908 522 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 TGFB3P10600 412 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 CCR4P51679 360 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 AGMOQ6ZNB7 445 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 OR10G6Q8NH81 332 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 EDEM1Q92611 657 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 USP7Q93009 1102 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 THOC1Q96FV9 657 aaKnown RBP8.89□□□□□ -0.99
CD47-204ENST00000471694 FAM96AQ9H5X1 160 aa8.89□□□□□ -0.99
CD47-204ENST00000471694 POLMQ9NP87 494 aaPredicted RBP8.89□□□□□ -0.99
CD47-204ENST00000471694 A0A087WUV0 522 aaPredicted RBP8.88□□□□□ -0.99
CD47-204ENST00000471694 GPM6BQ13491 265 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 TAF13Q15543 124 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 PSMD5Q16401 504 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 PTAR1Q7Z6K3 402 aaPredicted RBP8.88□□□□□ -0.99
CD47-204ENST00000471694 RASAL3Q86YV0 1011 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 GMCL1P1Q8NEA9 526 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 ARHGEF26Q96DR7 871 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 DNAJC11Q9NVH1 559 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 A0A087X0T9 212 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 GRXCR2A6NFK2 248 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 F9P00740 461 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 STIP1P31948 543 aaKnown RBP8.88□□□□□ -0.99
CD47-204ENST00000471694 ATP2C1P98194 919 aaPredicted RBP8.88□□□□□ -0.99
CD47-204ENST00000471694 SLC7A5Q01650 507 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 CCINQ13939 588 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 ARSJQ5FYB0 599 aaPredicted RBP8.88□□□□□ -0.99
CD47-204ENST00000471694 LAYNQ6UX15 382 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 DHX40Q8IX18 779 aaKnown RBP8.88□□□□□ -0.99
CD47-204ENST00000471694 TRAPPC12Q8WVT3 735 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 RERGQ96A58 199 aaPredicted RBP8.88□□□□□ -0.99
CD47-204ENST00000471694 SNX24Q9Y343 169 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 SPHKAPQ2M3C7 1700 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 MAGEC1O60732 1142 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 USP17L7P0C7H9 530 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 SELPP16109 830 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 CD52P31358 61 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 PTPN7P35236 360 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 SNRPFP62306 86 aaKnown RBP8.88□□□□□ -0.99
CD47-204ENST00000471694 CYP24A1Q07973 514 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 IFT88Q13099 833 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 PWP1Q13610 501 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 PGM5Q15124 567 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 ALG11Q2TAA5 492 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 GPR158Q5T848 1215 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 CAPRIN2Q6IMN6 1127 aaKnown RBP8.88□□□□□ -0.99
CD47-204ENST00000471694 MRNIPQ6NTE8 343 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 SLC30A10Q6XR72 485 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 PLEKHM3Q6ZWE6 761 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 SLFN11Q7Z7L1 901 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 PRPF39Q86UA1 669 aaKnown RBP8.88□□□□□ -0.99
CD47-204ENST00000471694 CATSPER3Q86XQ3 398 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 NUDCD3Q8IVD9 361 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 MB21D2Q8IYB1 491 aaPredicted RBP8.88□□□□□ -0.99
CD47-204ENST00000471694 SUN3Q8TAQ9 357 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 TMEM117Q9H0C3 514 aa8.88□□□□□ -0.99
CD47-204ENST00000471694 PAPOLBQ9NRJ5 636 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms