RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 METTL7BQ6UX53 244 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 TMPRSS12Q86WS5 348 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 PALB2Q86YC2 1186 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 TICAM1Q8IUC6 712 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 SRRM1Q8IYB3 904 aaKnown RBP4.11□□□□□ -1.75
LRCH3-213ENST00000471667 TAB3Q8N5C8 712 aaPredicted RBP4.11□□□□□ -1.75
LRCH3-213ENST00000471667 GIMAP8Q8ND71 665 aaPredicted RBP4.11□□□□□ -1.75
LRCH3-213ENST00000471667 URGCPQ8TCY9 931 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 MCRS1Q96EZ8 462 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 PTCHD1Q96NR3 888 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 CLSTN3Q9BQT9 956 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 GBP3Q9H0R5 595 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 TMX1Q9H3N1 280 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 TMPRSS5Q9H3S3 457 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 MTMR4Q9NYA4 1195 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 DACT1Q9NYF0 836 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 DKK3Q9UBP4 350 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 PHTF1Q9UMS5 762 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 SF3B6Q9Y3B4 125 aaKnown RBP4.11□□□□□ -1.75
LRCH3-213ENST00000471667 PCDHA1Q9Y5I3 950 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 RELNP78509 3460 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 WDR19Q8NEZ3 1342 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 NAV1Q8NEY1 1877 aa4.11□□□□□ -1.75
LRCH3-213ENST00000471667 COL5A1P20908 1838 aaPredicted RBP4.1□□□□□ -1.75
LRCH3-213ENST00000471667 MBLAC1A4D2B0 266 aaPredicted RBP4.1□□□□□ -1.75
LRCH3-213ENST00000471667 SH3D21A4FU49 640 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 K7ESM1 405 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 ZNF197O14709 1029 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 APAF1O14727 1248 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 DCLK1O15075 740 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 TGM5O43548 720 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 TLX3O43711 291 aaPredicted RBP4.1□□□□□ -1.75
LRCH3-213ENST00000471667 VAMP4O75379 141 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 AGFG2O95081 481 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 TP53P04637 393 aaPredicted RBP4.1□□□□□ -1.75
LRCH3-213ENST00000471667 CD3EP07766 207 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 SERPINF2P08697 491 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 SPATA31D3P0C874 917 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 NCAM1P13591 858 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 CD59P13987 128 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 INSRRP14616 1297 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 GNSP15586 552 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 CD247P20963 164 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 HOXA9P31269 272 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 L1CAMP32004 1257 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 MC3RP41968 323 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 NOLC1Q14978 699 aaKnown RBP eCLIP4.1□□□□□ -1.75
LRCH3-213ENST00000471667 INAVAQ3KP66 663 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 SPDYCQ5MJ68 293 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 SYDE2Q5VT97 1194 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 SPATA31D4Q6ZUB0 917 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 FERMT3Q86UX7 667 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 TSTD1Q8NFU3 115 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 GIPC2Q8TF65 315 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 DCAF4Q8WV16 495 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 CLEC4DQ8WXI8 215 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 CHMP4CQ96CF2 233 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 CEP95Q96GE4 821 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 CAMK1GQ96NX5 476 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 FERD3LQ96RJ6 166 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 TM9SF2Q99805 663 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 HERC2P3Q9BVR0 1158 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 ZDHHC5Q9C0B5 715 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 USP44Q9H0E7 712 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 SMARCAD1Q9H4L7 1026 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 AZI2Q9H6S1 392 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 CNOT11Q9UKZ1 510 aaKnown RBP4.1□□□□□ -1.75
LRCH3-213ENST00000471667 STX8Q9UNK0 236 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 ZNF451Q9Y4E5 1061 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 PCDHA2Q9Y5H9 948 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 ZMYM6O95789 1325 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 PTPRCP08575 1304 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 CELSR3Q9NYQ7 3312 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 LRRK2Q5S007 2527 aa4.1□□□□□ -1.75
LRCH3-213ENST00000471667 SDK1Q7Z5N4 2213 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 SMIM35A0A1B0GVV1 85 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 VPS37CA5D8V6 355 aaPredicted RBP4.09□□□□□ -1.75
LRCH3-213ENST00000471667 FAM149AA5PLN7 773 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 SLC38A8A6NNN8 435 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 SPECC1L-ADORA2AF8WAN1 911 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 CCL16O15467 120 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 AP5Z1O43299 807 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 MGEA5O60502 916 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 PPFIA2O75334 1257 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 STAM2O75886 525 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 GALTP07902 379 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 POU2F2P09086 479 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 GLI4P10075 376 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 ITGA4P13612 1032 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 MARK3P27448 753 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 CCND2P30279 289 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 POU4F1Q01851 419 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 NCAPHQ15003 741 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 PON2Q15165 354 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 SMAD1Q15797 465 aaKnown RBP4.09□□□□□ -1.75
LRCH3-213ENST00000471667 FBXO43Q4G163 708 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 CCDC157Q569K6 752 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 TANGO2Q6ICL3 276 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 UNC5AQ6ZN44 842 aa4.09□□□□□ -1.75
LRCH3-213ENST00000471667 RTL10Q7L3V2 364 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms