RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 HNRNPA0Q13151 305 aaKnown RBP6.75□□□□□ -1.33
CCDC39-202ENST00000471307 LY6KQ17RY6 165 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 CERKLQ49MI3 558 aaPredicted RBP6.75□□□□□ -1.33
CCDC39-202ENST00000471307 C4orf46Q504U0 113 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 L1TD1Q5T7N2 865 aaKnown RBP6.75□□□□□ -1.33
CCDC39-202ENST00000471307 ZNF66Q6ZN08 573 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 CHST15Q7LFX5 561 aaPredicted RBP6.75□□□□□ -1.33
CCDC39-202ENST00000471307 SFTPA1Q8IWL2 248 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 MYO1HQ8N1T3 1032 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 GALNT4Q8N4A0 578 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 LRTOMTQ8WZ04 291 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 ASB2Q96Q27 587 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 TRIM36Q9NQ86 728 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 TFCP2L1Q9NZI6 479 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 CPNE7Q9UBL6 633 aa6.75□□□□□ -1.33
CCDC39-202ENST00000471307 FER1L4A9Z1Z3 1794 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 GRIN2AQ12879 1464 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 UBE2Q2LH0YL09 131 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 ZBED1O96006 694 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 HMGB1P09429 215 aaKnown RBP6.74□□□□□ -1.33
CCDC39-202ENST00000471307 GKP32189 559 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 ZNF81P51508 661 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 GBX1Q14549 363 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 MTX3Q5HYI7 312 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 RNF220Q5VTB9 566 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 PAPD7Q5XG87 772 aaKnown RBP6.74□□□□□ -1.33
CCDC39-202ENST00000471307 DENND2CQ68D51 928 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 DARS2Q6PI48 645 aaKnown RBP6.74□□□□□ -1.33
CCDC39-202ENST00000471307 CATSPERGQ6ZRH7 1159 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 CHSY1Q86X52 802 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 TMEM171Q8WVE6 324 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 APIPQ96GX9 242 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 PRR25Q96S07 402 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 MACROD1Q9BQ69 325 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 SACM1LQ9NTJ5 587 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 AMFRQ9UKV5 643 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 USP22Q9UPT9 525 aa6.74□□□□□ -1.33
CCDC39-202ENST00000471307 DRG1Q9Y295 367 aaKnown RBP6.74□□□□□ -1.33
CCDC39-202ENST00000471307 GOLIM4O00461 696 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 USP1O94782 785 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 MYF5P13349 255 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 PHKG2P15735 406 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 RPL17P18621 184 aaKnown RBP6.73□□□□□ -1.33
CCDC39-202ENST00000471307 FAM193AP78312 1265 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 GFOD2Q3B7J2 385 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 PTCHD3Q3KNS1 767 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 MORN5Q5VZ52 161 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 GALNT16Q8N428 558 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 PNLDC1Q8NA58 520 aaKnown RBP6.73□□□□□ -1.33
CCDC39-202ENST00000471307 C8orf58Q8NAV2 365 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 DNAJB14Q8TBM8 379 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 FYTTD1Q96QD9 318 aaKnown RBP6.73□□□□□ -1.33
CCDC39-202ENST00000471307 VN1R3Q9BXE9 311 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 CIPCQ9C0C6 399 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 RNF7Q9UBF6 113 aa6.73□□□□□ -1.33
CCDC39-202ENST00000471307 KIAA0586Q9BVV6 1533 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 WDR91A4D1P6 747 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 A6NNZ2 444 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 BTBD19C9JJ37 291 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 TPP1O14773 563 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 CD3EAPO15446 510 aaKnown RBP6.72□□□□□ -1.33
CCDC39-202ENST00000471307 MGEA5O60502 916 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 EXOC3O60645 756 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 SRGAP2O75044 1071 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 PMPCBO75439 489 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 RASSF9O75901 435 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 INMTO95050 263 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 FGAP02671 866 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 CYP2D6P10635 497 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 MTHFSP49914 203 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 TIAL1Q01085 375 aaKnown RBP eCLIP6.72□□□□□ -1.33
CCDC39-202ENST00000471307 FMO1Q01740 532 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 ARHGEF7Q14155 803 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 CEP78Q5JTW2 689 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 CACHD1Q5VU97 1274 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 ZNF626Q68DY1 528 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 ZNF425Q6IV72 752 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 ZDHHC24Q6UX98 284 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 CCDC149Q6ZUS6 474 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 YTHDF3Q7Z739 585 aaKnown RBP6.72□□□□□ -1.33
CCDC39-202ENST00000471307 SMCR8Q8TEV9 937 aaPredicted RBP6.72□□□□□ -1.33
CCDC39-202ENST00000471307 SCARB1Q8WTV0 552 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 RITA1Q96K30 269 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 ZNF668Q96K58 619 aaPredicted RBP6.72□□□□□ -1.33
CCDC39-202ENST00000471307 MSLNLQ96KJ4 702 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 ZNF778Q96MU6 729 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 FAM83DQ9H4H8 585 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 PRDM11Q9NQV5 511 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 OGDHLQ9ULD0 1010 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 BTBD3Q9Y2F9 522 aa6.72□□□□□ -1.33
CCDC39-202ENST00000471307 NUP160Q12769 1436 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 CEP162Q5TB80 1403 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 AP4M1O00189 453 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 RGS10O43665 173 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 RRP9O43818 475 aaKnown RBP6.71□□□□□ -1.34
CCDC39-202ENST00000471307 PDE8BO95263 885 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 VNN1O95497 513 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 UQCRC1P31930 480 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 RENBPP51606 427 aa6.71□□□□□ -1.34
CCDC39-202ENST00000471307 TIRAPP58753 221 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms