RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 PIGFQ07326 219 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 BIRC3Q13489 604 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 USP17L6PQ6QN14 398 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 MED25Q71SY5 747 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 GAS2L3Q86XJ1 694 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 ELOA2Q8IYF1 753 aaPredicted RBP6.6□□□□□ -1.35
CKS1B-204ENST00000471245 FAM46DQ8NEK8 389 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 MUL1Q969V5 352 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 REXO4Q9GZR2 422 aaKnown RBP6.6□□□□□ -1.35
CKS1B-204ENST00000471245 MS4A7Q9GZW8 240 aaPredicted RBP6.6□□□□□ -1.35
CKS1B-204ENST00000471245 GJB4Q9NTQ9 266 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 MID2Q9UJV3 735 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 SH3BP1Q9Y3L3 701 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 VIRMAQ69YN4 1812 aaKnown RBP6.6□□□□□ -1.35
CKS1B-204ENST00000471245 DLEC1Q9Y238 1755 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 CGNL1Q0VF96 1302 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 MAP3K19Q56UN5 1328 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 MYH14Q7Z406 1995 aaKnown RBP6.59□□□□□ -1.35
CKS1B-204ENST00000471245 DICER1Q9UPY3 1922 aaKnown RBP6.59□□□□□ -1.35
CKS1B-204ENST00000471245 LOC102723971A0A1B0GUV8 181 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 SYT5O00445 386 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 PODXLO00592 558 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 RASSF9O75901 435 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 KIF20AO95235 890 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 CKBP12277 381 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 FCER1AP12319 257 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 HSD3B1P14060 373 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 DPEP1P16444 411 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 ACVR2AP27037 513 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 CHN2P52757 468 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 COPAP53621 1224 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 GALNT1Q10472 559 aaPredicted RBP6.59□□□□□ -1.35
CKS1B-204ENST00000471245 FOXO1Q12778 655 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 GRM1Q13255 1194 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 NOMO2Q5JPE7 1267 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 NAIF1Q69YI7 327 aaPredicted RBP6.59□□□□□ -1.35
CKS1B-204ENST00000471245 FBXO38Q6PIJ6 1188 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 ANKRD35Q8N283 1001 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 TRAPPC12Q8WVT3 735 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 C18orf8Q96DM3 657 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 PPP1R9BQ96SB3 815 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 SIN3AQ96ST3 1273 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 HEPHQ9BQS7 1158 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 XPNPEP3Q9NQH7 507 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 ETAA1Q9NY74 926 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 CAPN11Q9UMQ6 739 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 GTF2A1LQ9UNN4 478 aa6.59□□□□□ -1.35
CKS1B-204ENST00000471245 A0A1W2PP64 1363 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 PCDH11XQ9BZA7 1347 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 PCDH11YQ9BZA8 1340 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 FAM234BA2RU67 622 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 NPC1O15118 1278 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 KCNQ3O43525 872 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 KCNA3P22001 575 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 GABRB3P28472 473 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 MSX2P35548 267 aaPredicted RBP6.58□□□□□ -1.36
CKS1B-204ENST00000471245 FOXL1Q12952 345 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 PFKFB4Q16877 469 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 HTR3DQ70Z44 454 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 POLNQ7Z5Q5 900 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 KRT73Q86Y46 540 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 RHOT2Q8IXI1 618 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 CFAP52Q8N1V2 620 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 MIEF2Q96C03 454 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 LRRC46Q96FV0 321 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 SMOQ99835 787 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 MESP1Q9BRJ9 268 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 TMEM120AQ9BXJ8 343 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 TLR10Q9BXR5 811 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 TMEM8AQ9HCN3 771 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 CASS4Q9NQ75 786 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 HEYLQ9NQ87 328 aaPredicted RBP6.58□□□□□ -1.36
CKS1B-204ENST00000471245 HDAC9Q9UKV0 1011 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 CNOT11Q9UKZ1 510 aaKnown RBP6.58□□□□□ -1.36
CKS1B-204ENST00000471245 PCDHGB3Q9Y5G1 929 aa6.58□□□□□ -1.36
CKS1B-204ENST00000471245 AFDNP55196 1824 aaKnown RBP6.57□□□□□ -1.36
CKS1B-204ENST00000471245 KIF20BQ96Q89 1820 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 A0A087WZ62 844 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 CYP27B1O15528 508 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 SH3BP5O60239 455 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 PRSS23O95084 383 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 IDEP14735 1019 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 VEGFAP15692 232 aaPredicted RBP6.57□□□□□ -1.36
CKS1B-204ENST00000471245 BTF3P20290 206 aaKnown RBP6.57□□□□□ -1.36
CKS1B-204ENST00000471245 AMPHP49418 695 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 ITPK1Q13572 414 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 SLC29A2Q14542 456 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 RAB30Q15771 203 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 INSCQ1MX18 579 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 AGAP9Q5VTM2 703 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 ARL6IP4Q66PJ3 421 aaKnown RBP6.57□□□□□ -1.36
CKS1B-204ENST00000471245 TCTN3Q6NUS6 607 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 SYT12Q8IV01 421 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 FUKQ8N0W3 1084 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 D2HGDHQ8N465 521 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 MB21D1Q8N884 522 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 CCDC150Q8NCX0 1101 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 CXorf38Q8TB03 319 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 RAPGEF4Q8WZA2 1011 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 TRIM63Q969Q1 353 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms