RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 PTH2RP49190 550 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 SLC13A2Q13183 592 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 CTBP1Q13363 440 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 RAB32Q13637 225 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 E2F2Q14209 437 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 LLGL1Q15334 1064 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 CNN3Q15417 329 aaKnown RBP5.02□□□□□ -1.61
COL9A1-206ENST00000470652 SLC44A4Q53GD3 710 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 AKNAD1Q5T1N1 836 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 BOLLQ8N9W6 283 aaKnown RBP5.02□□□□□ -1.61
COL9A1-206ENST00000470652 FAM98AQ8NCA5 519 aaKnown RBP5.02□□□□□ -1.61
COL9A1-206ENST00000470652 ANKS1AQ92625 1134 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 TSR2Q969E8 191 aaKnown RBP5.02□□□□□ -1.61
COL9A1-206ENST00000470652 UROC1Q96N76 676 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 MESP1Q9BRJ9 268 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 C22orf23Q9BZE7 217 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 R3HDMLQ9H3Y0 253 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 PRDM13Q9H4Q3 707 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 TMEM94Q12767 1356 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 DLC1Q96QB1 1528 aa5.02□□□□□ -1.61
COL9A1-206ENST00000470652 NKTRP30414 1462 aaKnown RBP5.01□□□□□ -1.61
COL9A1-206ENST00000470652 SPATA31A6Q5VVP1 1343 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 TECPR2O15040 1411 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 LINC00473A8K010 186 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 VSTM5A8MXK1 200 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 ISM1B1AKI9 464 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 MYO1FO00160 1098 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 FRS3O43559 492 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 PROP1O75360 226 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 IGLV2-14P01704 120 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 HRGP04196 525 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 NR2F6P10588 404 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 ATXN1P54253 815 aaKnown RBP5.01□□□□□ -1.61
COL9A1-206ENST00000470652 GBX1Q14549 363 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 CCDC142Q17RM4 750 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 MGAT5BQ3V5L5 792 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 FAM153CQ494X1 144 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 ZNF618Q5T7W0 954 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 ARHGAP40Q5TG30 622 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 SWSAP1Q6NVH7 229 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 CHST15Q7LFX5 561 aaPredicted RBP5.01□□□□□ -1.61
COL9A1-206ENST00000470652 ARHGEF25Q86VW2 580 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 GAS2L3Q86XJ1 694 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 COL23A1Q86Y22 540 aaPredicted RBP5.01□□□□□ -1.61
COL9A1-206ENST00000470652 TTC8Q8TAM2 541 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 BBC3Q96PG8 261 aaPredicted RBP5.01□□□□□ -1.61
COL9A1-206ENST00000470652 HAPLN3Q96S86 360 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 ZNF518BQ9C0D4 1074 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 KLK15Q9H2R5 256 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 SERHLQ9NQF3 203 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 PRDM11Q9NQV5 511 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 SERTAD4Q9NUC0 356 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 ZSCAN32Q9NX65 697 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 PTGFRNQ9P2B2 879 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 KLHL42Q9P2K6 505 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 SERTAD3Q9UJW9 196 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 SSX2IPQ9Y2D8 614 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 TOPAZ1Q8N9V7 1692 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 ABCC11Q96J66 1382 aa5.01□□□□□ -1.61
COL9A1-206ENST00000470652 KIF7Q2M1P5 1343 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 CENPJQ9HC77 1338 aaPredicted RBP5□□□□□ -1.61
COL9A1-206ENST00000470652 PTCH1Q13635 1447 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 SLC16A3O15427 465 aaKnown RBP5□□□□□ -1.61
COL9A1-206ENST00000470652 ONECUT2O95948 504 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 ZBED1O96006 694 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 ELFN1P0C7U0 828 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 ALDH9A1P49189 494 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 TSTD2Q5T7W7 516 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 RNF220Q5VTB9 566 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 PPP4R4Q6NUP7 873 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 DARS2Q6PI48 645 aaKnown RBP5□□□□□ -1.61
COL9A1-206ENST00000470652 CCDC149Q6ZUS6 474 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 ZNF551Q7Z340 670 aaPredicted RBP5□□□□□ -1.61
COL9A1-206ENST00000470652 C14orf80Q86SX3 495 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 FMNL3Q8IVF7 1028 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 MPP5Q8N3R9 675 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 SMURF2Q9HAU4 748 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 IL17RBQ9NRM6 502 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 ASB6Q9NWX5 421 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 DKK3Q9UBP4 350 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 DDX20Q9UHI6 824 aaKnown RBP5□□□□□ -1.61
COL9A1-206ENST00000470652 NDRG4Q9ULP0 352 aaKnown RBP5□□□□□ -1.61
COL9A1-206ENST00000470652 ST3GAL5Q9UNP4 418 aa5□□□□□ -1.61
COL9A1-206ENST00000470652 ADGRB2O60241 1585 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 USP19O94966 1318 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 FRMPD2Q68DX3 1309 aaPredicted RBP4.99□□□□□ -1.61
COL9A1-206ENST00000470652 A6NNZ2 444 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 GOLIM4O00461 696 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 TBX3O15119 743 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 C1RP00736 705 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 PDHA1P08559 390 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 GPD1P21695 349 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 CD38P28907 300 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 KRT17Q04695 432 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 MYO1EQ12965 1108 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 EIF2B5Q13144 721 aaKnown RBP4.99□□□□□ -1.61
COL9A1-206ENST00000470652 RGS7BPQ6MZT1 257 aaPredicted RBP4.99□□□□□ -1.61
COL9A1-206ENST00000470652 APOA5Q6Q788 366 aa4.99□□□□□ -1.61
COL9A1-206ENST00000470652 WDR75Q8IWA0 830 aaKnown RBP4.99□□□□□ -1.61
COL9A1-206ENST00000470652 SLC15A3Q8IY34 581 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms