RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 MYOFQ9NZM1 2061 aa18.56■□□□□ 0.56
COL7A1-208ENST00000470076 MYH10P35580 1976 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 LAMA1P25391 3075 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 A0A1B0GVL5 298 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 E2F8A0AVK6 867 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 TNFRSF10BO14763 440 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 ADH1CP00326 375 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 NR3C1P04150 777 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 PFKFB1P16118 471 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 SF3A2Q15428 464 aaKnown RBP18.55■□□□□ 0.56
COL7A1-208ENST00000470076 ZACNQ401N2 412 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 C2orf27AQ580R0 203 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 PPM1JQ5JR12 505 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 PLA2G2CQ5R387 149 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 HECTD3Q5T447 861 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 SNX30Q5VWJ9 437 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 PAQR9Q6ZVX9 377 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 SPRYD3Q8NCJ5 442 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 SDCBP2Q9H190 292 aa18.55■□□□□ 0.56
COL7A1-208ENST00000470076 DUSP15Q9H1R2 295 aaPredicted RBP18.55■□□□□ 0.56
COL7A1-208ENST00000470076 FAM92AA1XBS5 289 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 IKBKBO14920 756 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 COCHO43405 550 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 RHOBTB1O94844 696 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 KIF20AO95235 890 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 ADRB1P08588 477 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 MPLP40238 635 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 TUBP50607 506 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 DGKEP52429 567 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 SLC5A3P53794 718 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 SEC13P55735 322 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 DLG4P78352 724 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 MRPS21P82921 87 aaKnown RBP18.54■□□□□ 0.56
COL7A1-208ENST00000470076 CCDC6Q16204 474 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 IL31Q6EBC2 164 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 RHBDF2Q6PJF5 856 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 ACOT1Q86TX2 421 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 C11orf74Q86VG3 221 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 UNC93AQ86WB7 457 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 FUKQ8N0W3 1084 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 SCAMP5Q8TAC9 235 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 OTUB2Q96DC9 234 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 PNKPQ96T60 521 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 VPS45Q9NRW7 570 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 KRT82Q9NSB4 513 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 CHORDC1Q9UHD1 332 aaPredicted RBP18.54■□□□□ 0.56
COL7A1-208ENST00000470076 MMP17Q9ULZ9 603 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 HPSEQ9Y251 543 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 FRMD4BQ9Y2L6 1034 aa18.54■□□□□ 0.56
COL7A1-208ENST00000470076 SCAMP3O14828 347 aaKnown RBP18.53■□□□□ 0.56
COL7A1-208ENST00000470076 CALUO43852 315 aaPredicted RBP18.53■□□□□ 0.56
COL7A1-208ENST00000470076 AP1G2O75843 785 aa18.53■□□□□ 0.56
COL7A1-208ENST00000470076 ASS1P00966 412 aaKnown RBP18.53■□□□□ 0.56
COL7A1-208ENST00000470076 TRIM21P19474 475 aaKnown RBP18.53■□□□□ 0.56
COL7A1-208ENST00000470076 USP39Q53GS9 565 aaKnown RBP18.53■□□□□ 0.56
COL7A1-208ENST00000470076 CEP135Q66GS9 1140 aa18.53■□□□□ 0.56
COL7A1-208ENST00000470076 SV2AQ7L0J3 742 aa18.53■□□□□ 0.56
COL7A1-208ENST00000470076 RASSF3Q86WH2 238 aa18.53■□□□□ 0.56
COL7A1-208ENST00000470076 CRYBG2Q8N1P7 616 aa18.53■□□□□ 0.56
COL7A1-208ENST00000470076 CCDC47Q96A33 483 aaKnown RBP18.53■□□□□ 0.56
COL7A1-208ENST00000470076 ELMO3Q96BJ8 720 aa18.53■□□□□ 0.56
COL7A1-208ENST00000470076 ZFRQ96KR1 1074 aaKnown RBP18.53■□□□□ 0.56
COL7A1-208ENST00000470076 SPATA32Q96LK8 384 aa18.53■□□□□ 0.56
COL7A1-208ENST00000470076 DUSP9Q99956 384 aaKnown RBP18.53■□□□□ 0.56
COL7A1-208ENST00000470076 TRAF3IP3Q9Y228 551 aa18.53■□□□□ 0.56
COL7A1-208ENST00000470076 CHD8Q9HCK8 2581 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 ABCA7Q8IZY2 2146 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.52■□□□□ 0.56
COL7A1-208ENST00000470076 MAPK13O15264 365 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 KAT7O95251 611 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 APODP05090 189 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 ZDHHC11BP0C7U3 371 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 ADH5P11766 374 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 SLC6A11P48066 632 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 NDST1P52848 882 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 KRT85P78386 507 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 CRY1Q16526 586 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 HSF5Q4G112 596 aaPredicted RBP18.52■□□□□ 0.56
COL7A1-208ENST00000470076 SLC2A14Q8TDB8 520 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 CNOT6LQ96LI5 555 aaKnown RBP18.52■□□□□ 0.56
COL7A1-208ENST00000470076 FBXO44Q9H4M3 255 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 CCSER2Q9H7U1 834 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 CSNK1G1Q9HCP0 422 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 SH3BP1Q9Y3L3 701 aa18.52■□□□□ 0.56
COL7A1-208ENST00000470076 NUP205Q92621 2012 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 A0A0A0MRY4 1105 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 DCLK1O15075 740 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 CCDC130P13994 396 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 GBP1P32455 592 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 GRIA2P42262 883 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 PIK3CAP42336 1068 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 SYKP43405 635 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 ASPAP45381 313 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 GAD2Q05329 585 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 LY6G5CQ5SRR4 150 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 ANO7Q6IWH7 933 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 CCDC33Q8N5R6 958 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 ZMIZ2Q8NF64 920 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 SMOQ99835 787 aa18.51■□□□□ 0.55
COL7A1-208ENST00000470076 TPSD1Q9BZJ3 242 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms