RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 R4GN57 208 aa14.9□□□□□ -0.02
COMMD3-208ENST00000470045 HHLA1C9JL84 531 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 TRDMT1O14717 391 aaKnown RBP14.89□□□□□ -0.03
COMMD3-208ENST00000470045 PMM2O15305 246 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 FAM200BP0CF97 657 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 CD58P19256 250 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 TUBP50607 506 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 IFRD2Q12894 506 aaPredicted RBP14.89□□□□□ -0.03
COMMD3-208ENST00000470045 PON2Q15165 354 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 EML3Q32P44 896 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 TMEM196Q5HYL7 178 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 ZC3H14Q6PJT7 736 aaKnown RBP14.89□□□□□ -0.03
COMMD3-208ENST00000470045 FILIP1Q7Z7B0 1213 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 ZBTB44Q8NCP5 570 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 ATP2A3Q93084 1043 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 CYFIP2Q96F07 1278 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 ARID3AQ99856 593 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 ECT2Q9H8V3 914 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 CISHQ9NSE2 258 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 RBM12Q9NTZ6 932 aaKnown RBP14.89□□□□□ -0.03
COMMD3-208ENST00000470045 DUS2Q9NX74 493 aaKnown RBP14.89□□□□□ -0.03
COMMD3-208ENST00000470045 WNT6Q9Y6F9 365 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 FAM186AA6NE01 2351 aa14.89□□□□□ -0.03
COMMD3-208ENST00000470045 DMDP11532 3685 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 LEFTY2O00292 366 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 PAPSS2O95340 614 aaPredicted RBP14.88□□□□□ -0.03
COMMD3-208ENST00000470045 ADORA2BP29275 332 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 GJA4P35212 333 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 IFNAR2P48551 515 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 CCR3P51677 355 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 MAP3K7CLP57077 242 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 CSTF1Q05048 431 aaKnown RBP14.88□□□□□ -0.03
COMMD3-208ENST00000470045 Q6ZS52 159 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 GPRIN1Q7Z2K8 1008 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 SYNPOQ8N3V7 929 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 SPEM1Q8N4L4 309 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 CPA6Q8N4T0 437 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 TRIML1Q8N9V2 468 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 NELFBQ8WX92 580 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 TATDN2Q93075 761 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 ZFRQ96KR1 1074 aaKnown RBP14.88□□□□□ -0.03
COMMD3-208ENST00000470045 FAM126AQ9BYI3 521 aaPredicted RBP14.88□□□□□ -0.03
COMMD3-208ENST00000470045 GMIPQ9P107 970 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 PCDHGA2Q9Y5H1 932 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 CPQQ9Y646 472 aa14.88□□□□□ -0.03
COMMD3-208ENST00000470045 RIF1Q5UIP0 2472 aaKnown RBP14.88□□□□□ -0.03
COMMD3-208ENST00000470045 BICDL2A1A5D9 508 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 BIN1O00499 593 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 COCHO43405 550 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 LILRB5O75023 590 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 FMO5P49326 533 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 RAD23BP54727 409 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 MARSP56192 900 aaKnown RBP14.87□□□□□ -0.03
COMMD3-208ENST00000470045 AMPD2Q01433 879 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 PPP1R26Q5T8A7 1209 aaPredicted RBP14.87□□□□□ -0.03
COMMD3-208ENST00000470045 KLHL10Q6JEL2 608 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 FSTL4Q6MZW2 842 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 DDX42Q86XP3 938 aaKnown RBP eCLIP14.87□□□□□ -0.03
COMMD3-208ENST00000470045 UBR7Q8N806 425 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 SLC4A11Q8NBS3 891 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 DNAI2Q9GZS0 605 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 FBXO44Q9H4M3 255 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 ZSCAN32Q9NX65 697 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 CTNND2Q9UQB3 1225 aa14.87□□□□□ -0.03
COMMD3-208ENST00000470045 GVINP1Q7Z2Y8 2422 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 OTOGLQ3ZCN5 2332 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 ZNF292O60281 2723 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 ABL1P00519 1130 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 PGFP49763 221 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 PAK1Q13153 545 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 CUL2Q13617 745 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 GAB4Q2WGN9 574 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 ZNF394Q53GI3 561 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 HECTD3Q5T447 861 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 ARHGAP17Q68EM7 881 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 TSSK4Q6SA08 328 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 TRIM59Q8IWR1 403 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 TMEM176AQ96HP8 235 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 DUSP16Q9BY84 665 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 LINC00597Q9H2U6 94 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 CCSER2Q9H7U1 834 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 CYLDQ9NQC7 956 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 SMPD4Q9NXE4 827 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 KIAA1468Q9P260 1216 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 CHORDC1Q9UHD1 332 aaPredicted RBP14.86□□□□□ -0.03
COMMD3-208ENST00000470045 SCML2Q9UQR0 700 aa14.86□□□□□ -0.03
COMMD3-208ENST00000470045 P4HA2O15460 535 aa14.85□□□□□ -0.03
COMMD3-208ENST00000470045 ATMINO43313 823 aaPredicted RBP14.85□□□□□ -0.03
COMMD3-208ENST00000470045 NFATC1O95644 943 aa14.85□□□□□ -0.03
COMMD3-208ENST00000470045 LMNAP02545 664 aaKnown RBP14.85□□□□□ -0.03
COMMD3-208ENST00000470045 MBL2P11226 248 aaPredicted RBP14.85□□□□□ -0.03
COMMD3-208ENST00000470045 CXCL12P48061 93 aa14.85□□□□□ -0.03
COMMD3-208ENST00000470045 KIF11P52732 1056 aa14.85□□□□□ -0.03
COMMD3-208ENST00000470045 SATB1Q01826 763 aa14.85□□□□□ -0.03
COMMD3-208ENST00000470045 GRSF1Q12849 480 aaKnown RBP eCLIP14.85□□□□□ -0.03
COMMD3-208ENST00000470045 PPP2R5DQ14738 602 aa14.85□□□□□ -0.03
COMMD3-208ENST00000470045 CCDC40Q4G0X9 1142 aa14.85□□□□□ -0.03
COMMD3-208ENST00000470045 NAIF1Q69YI7 327 aaPredicted RBP14.85□□□□□ -0.03
COMMD3-208ENST00000470045 CLEC17AQ6ZS10 378 aa14.85□□□□□ -0.03
COMMD3-208ENST00000470045 SUMF1Q8NBK3 374 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms