RNA–Protein interactions for RNA: ENST00000469966.1

CCDC66-212, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-212ENST00000469966 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.06□□□□□ -1.6
CCDC66-212ENST00000469966 RRAGAQ7L523 313 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 LRRTM4Q86VH4 590 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 GAS2L3Q86XJ1 694 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 ESX1Q8N693 406 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 GPR150Q8NGU9 434 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 BPIFB1Q8TDL5 484 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 OTUD7AQ8TE49 926 aaPredicted RBP5.06□□□□□ -1.6
CCDC66-212ENST00000469966 NUP133Q8WUM0 1156 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 GRAMD1AQ96CP6 724 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 REXO4Q9GZR2 422 aaKnown RBP5.06□□□□□ -1.6
CCDC66-212ENST00000469966 SLC25A32Q9H2D1 315 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 DHX36Q9H2U1 1008 aaKnown RBP5.06□□□□□ -1.6
CCDC66-212ENST00000469966 SMOC2Q9H3U7 446 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 TOR3AQ9H497 397 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 SEPSECSQ9HD40 501 aaKnown RBP5.06□□□□□ -1.6
CCDC66-212ENST00000469966 RIC8AQ9NPQ8 531 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 FAM30AQ9NZY2 134 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 LPAR3Q9UBY5 353 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 SWAP70Q9UH65 585 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 FEM1BQ9UK73 627 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 GJD2Q9UKL4 321 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 MRPS17Q9Y2R5 130 aaKnown RBP5.06□□□□□ -1.6
CCDC66-212ENST00000469966 RAD54BQ9Y620 910 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 CDY1Q9Y6F8 540 aa5.06□□□□□ -1.6
CCDC66-212ENST00000469966 AATKQ6ZMQ8 1374 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 TOR1BO14657 336 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 PCDH17O14917 1159 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 DNPH1O43598 174 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 MBD4O95243 580 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 LMNAP02545 664 aaKnown RBP5.05□□□□□ -1.6
CCDC66-212ENST00000469966 JUPP14923 745 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 GCLCP48506 637 aaPredicted RBP5.05□□□□□ -1.6
CCDC66-212ENST00000469966 PXNP49023 591 aaPredicted RBP5.05□□□□□ -1.6
CCDC66-212ENST00000469966 TOB1P50616 345 aaPredicted RBP5.05□□□□□ -1.6
CCDC66-212ENST00000469966 PAPOLAP51003 745 aaKnown RBP5.05□□□□□ -1.6
CCDC66-212ENST00000469966 BCAT1P54687 386 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 AP2B1P63010 937 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 TCF15Q12870 199 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 GPS1Q13098 491 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 CUL4BQ13620 913 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 TSHZ3Q63HK5 1081 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 TMEM108Q6UXF1 575 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 HEATR4Q86WZ0 1026 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 RASGRP3Q8IV61 690 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 DNAJB14Q8TBM8 379 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 EID2BQ96D98 161 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 RTKNQ9BST9 563 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 KRTAP9-8Q9BYQ0 159 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 TAF1DQ9H5J8 278 aaPredicted RBP5.05□□□□□ -1.6
CCDC66-212ENST00000469966 XPNPEP3Q9NQH7 507 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 DNMT3BQ9UBC3 853 aaKnown RBP5.05□□□□□ -1.6
CCDC66-212ENST00000469966 DKK4Q9UBT3 224 aa5.05□□□□□ -1.6
CCDC66-212ENST00000469966 CCDC195A0A1B0GUA6 201 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 GAGE12BA1L429 117 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 GRID2IPA4D2P6 1211 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 GAGE12HA6NDE8 117 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 TISP43B9A030 160 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 DIRC3C9JPN6 131 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 CCNT2O60583 730 aaKnown RBP5.04□□□□□ -1.6
CCDC66-212ENST00000469966 FAM163BP0C2L3 166 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 SPATA31D3P0C874 917 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 XBP1P17861 261 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 RXRAP19793 462 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 GCSHP23434 173 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 ZFP36P26651 326 aaKnown RBP5.04□□□□□ -1.6
CCDC66-212ENST00000469966 KLRK1P26718 216 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 MAN1A1P33908 653 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 ADD2P35612 726 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 PNLIPRP1P54315 467 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 POLE2P56282 527 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 LOXL3P58215 753 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 IRX6P78412 446 aaPredicted RBP5.04□□□□□ -1.6
CCDC66-212ENST00000469966 MC2RQ01718 297 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 KRTAP1-1Q07627 177 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 FAM110CQ1W6H9 321 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 BTBD16Q32M84 506 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 ZNF750Q32MQ0 723 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 ATPAF1Q5TC12 328 aaPredicted RBP5.04□□□□□ -1.6
CCDC66-212ENST00000469966 RETSATQ6NUM9 610 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 FAM180BQ6P0A1 224 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 DRICH1Q6PGQ1 229 aaPredicted RBP5.04□□□□□ -1.6
CCDC66-212ENST00000469966 SPATA31D4Q6ZUB0 917 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 KRT73Q86Y46 540 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 TMTC1Q8IUR5 882 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 SLC44A2Q8IWA5 706 aaPredicted RBP5.04□□□□□ -1.6
CCDC66-212ENST00000469966 SPARTQ8N0X7 666 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 NME8Q8N427 588 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 SCAMP5Q8TAC9 235 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 SPPL3Q8TCT6 385 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 CSGALNACT1Q8TDX6 532 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 PPP2R3CQ969Q6 453 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 PNKPQ96T60 521 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 PABPC3Q9H361 631 aaKnown RBP5.04□□□□□ -1.6
CCDC66-212ENST00000469966 ZNF768Q9H5H4 540 aaKnown RBP5.04□□□□□ -1.6
CCDC66-212ENST00000469966 ZBTB26Q9HCK0 441 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 TMOD4Q9NZQ9 345 aa5.04□□□□□ -1.6
CCDC66-212ENST00000469966 VSX1Q9NZR4 365 aaPredicted RBP5.04□□□□□ -1.6
CCDC66-212ENST00000469966 RGS17Q9UGC6 210 aaPredicted RBP5.04□□□□□ -1.6
CCDC66-212ENST00000469966 CENPVL1A0A0U1RR11 272 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms