RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 KLHDC10Q6PID8 442 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 MTSS1LQ765P7 747 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 HS6ST3Q8IZP7 471 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 WDTC1Q8N5D0 677 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 TDRD5Q8NAT2 981 aaKnown RBP13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 C1orf131Q8NDD1 294 aaKnown RBP13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 SCAMP5Q8TAC9 235 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 SHKBP1Q8TBC3 707 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 IPO4Q8TEX9 1081 aaKnown RBP13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 CPLX3Q8WVH0 158 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 GOLGA1Q92805 767 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 VCPIP1Q96JH7 1222 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 PPP1R13BQ96KQ4 1090 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 DNAJC7Q99615 494 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 TRPV4Q9HBA0 871 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 ZNF334Q9HCZ1 680 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 ACP6Q9NPH0 428 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 IGSF9Q9P2J2 1179 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 PTPRDP23468 1912 aa13.29□□□□□ -0.28
SPTLC1-204ENST00000469778 TRAV19A0A0A6YYK7 116 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 A0A1W2PRU2 124 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 GOLGA6L3A6NEY3 463 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 GOLGA6L6A8MZA4 724 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 LOC730098B7Z3J9 87 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 AKR1B15C9JRZ8 316 aaPredicted RBP13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 AP5Z1O43299 807 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 MOSPD3O75425 235 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 CYP1A1P04798 512 aaPredicted RBP13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 PNMA6AP0CW24 399 aaPredicted RBP13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 RALAP11233 206 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 TNFAIP3P21580 790 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 GBP2P32456 591 aaPredicted RBP13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 SCNN1AP37088 669 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 CDR1P51861 262 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 USP46P62068 366 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 NTHL1P78549 312 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 ARID5AQ03989 594 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 PDCLQ13371 301 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 ZNF268Q14587 947 aaPredicted RBP13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 SLC5A9Q2M3M2 681 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 HECTD3Q5T447 861 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 TMEM150AQ86TG1 271 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 NPAS3Q8IXF0 933 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 ITFG1Q8TB96 612 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 C18orf8Q96DM3 657 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 SYNCQ9H7C4 482 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 OBP2AQ9NY56 170 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 WDR35Q9P2L0 1181 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 REV3LO60673 3130 aa13.28□□□□□ -0.28
SPTLC1-204ENST00000469778 C19orf67A6NJJ6 358 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 MMEP08473 750 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 USP17L7P0C7H9 530 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 HDCP19113 662 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 AVPR1AP37288 418 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 CCR2P41597 374 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 NSFP46459 744 aaKnown RBP13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 GABRB2P47870 512 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 FMO1Q01740 532 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 EFHC1Q5JVL4 640 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 GPR158Q5T848 1215 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 TOGARAM2Q6ZUX3 1019 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 GET4Q7L5D6 327 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 ARCQ7LC44 396 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 TMC6Q7Z403 805 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 ERICH1Q86X53 443 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 DDX42Q86XP3 938 aaKnown RBP eCLIP13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 PHF13Q86YI8 300 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 CMTM8Q8IZV2 173 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 SMARCD2Q92925 531 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 SYT11Q9BT88 431 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 HAUS4Q9H6D7 363 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 KIF9Q9HAQ2 790 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 ST7Q9NRC1 585 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 ABCC13Q9NSE7 274 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 OLA1Q9NTK5 396 aaKnown RBP13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 ASNSD1Q9NWL6 643 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 CHORDC1Q9UHD1 332 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 STRIP2Q9ULQ0 834 aa13.27□□□□□ -0.29
SPTLC1-204ENST00000469778 SSU72P8A0A1W2PR75 194 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 ANHXE9PGG2 379 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 MFAP3LO75121 409 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 ECI2O75521 394 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 SLC34A2O95436 690 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 ADCY5O95622 1261 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 OLFM2O95897 454 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 OAS1P00973 400 aaKnown RBP13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 UNGP13051 313 aaPredicted RBP13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 IL9P15248 144 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 TCF3P15923 654 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 CHRNB2P17787 502 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 MMP8P22894 467 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 MRE11P49959 708 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 KCNQ1P51787 676 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 KPNA1P52294 538 aaPredicted RBP13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 DAOAP59103 153 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 NOMO3P69849 1222 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 SLC7A9P82251 487 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 CENPCQ03188 943 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 ZP2Q05996 745 aa13.26□□□□□ -0.29
SPTLC1-204ENST00000469778 ADIGQ0VDE8 80 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms