RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 QRICH1Q2TAL8 776 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 APOA5Q6Q788 366 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 HEATR3Q7Z4Q2 680 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 SGMS1Q86VZ5 419 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 PLA2G15Q8NCC3 412 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 GLB1L3Q8NCI6 653 aaPredicted RBP7.05□□□□□ -1.28
PTCD3-208ENST00000469585 BICD2Q8TD16 824 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 NSUN6Q8TEA1 469 aaKnown RBP7.05□□□□□ -1.28
PTCD3-208ENST00000469585 DEFB118Q96PH6 123 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 KCNC2Q96PR1 638 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 SPZ1Q9BXG8 430 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 LRRC2Q9BYS8 371 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 IL25Q9H293 177 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 MAD2L2Q9UI95 211 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 SNX14Q9Y5W7 946 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 DAPK3O43293 454 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 B4GALT4O60513 344 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 ZSCAN20P17040 1043 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-208ENST00000469585 GNA11P29992 359 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 NAPAP54920 295 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 SNAP25P60880 206 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 MEF2AQ02078 507 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-208ENST00000469585 PPP3CAQ08209 521 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 LRRC41Q15345 812 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 STXBP2Q15833 593 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 RNF151Q2KHN1 245 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 MUM1L1Q5H9M0 696 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 KCNV1Q6PIU1 500 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 STOX1Q6ZVD7 989 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 TAS1R1Q7RTX1 841 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 PPM1NQ8N819 430 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 PCSK9Q8NBP7 692 aaKnown RBP7.04□□□□□ -1.28
PTCD3-208ENST00000469585 U2AF1L4Q8WU68 220 aaKnown RBP7.04□□□□□ -1.28
PTCD3-208ENST00000469585 TRIB2Q92519 343 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 PAWRQ96IZ0 340 aaKnown RBP7.04□□□□□ -1.28
PTCD3-208ENST00000469585 UIMC1Q96RL1 719 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 IWS1Q96ST2 819 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 C6orf50Q9HD87 102 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 A1CFQ9NQ94 594 aaKnown RBP7.04□□□□□ -1.28
PTCD3-208ENST00000469585 CYP39A1Q9NYL5 469 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 DDX20Q9UHI6 824 aaKnown RBP7.04□□□□□ -1.28
PTCD3-208ENST00000469585 ZNF180Q9UJW8 692 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 GJD2Q9UKL4 321 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 GIT1Q9Y2X7 761 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 NR2E3Q9Y5X4 410 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 PLXNB2O15031 1838 aa7.04□□□□□ -1.28
PTCD3-208ENST00000469585 ARHGAP6O43182 974 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 SEPT4O43236 478 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 RFPL1O75677 317 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 STAM2O75886 525 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 SGPL1O95470 568 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 CNOT4O95628 575 aaKnown RBP7.03□□□□□ -1.28
PTCD3-208ENST00000469585 LTA4HP09960 611 aaKnown RBP7.03□□□□□ -1.28
PTCD3-208ENST00000469585 CTSSP25774 331 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 CCND2P30279 289 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 CYP2C19P33261 490 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 ADCY7P51828 1080 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 ADKP55263 362 aaKnown RBP7.03□□□□□ -1.28
PTCD3-208ENST00000469585 ADAM8P78325 824 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 TROAPQ12815 778 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 BAATQ14032 418 aaPredicted RBP7.03□□□□□ -1.28
PTCD3-208ENST00000469585 BORAQ6PGQ7 559 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 ABHD15Q6UXT9 468 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 TMTC3Q6ZXV5 915 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 ARMCX2Q7L311 632 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 LGI4Q8N135 537 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 REPS2Q8NFH8 660 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 SCFD2Q8WU76 684 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 JPH3Q8WXH2 748 aaPredicted RBP7.03□□□□□ -1.28
PTCD3-208ENST00000469585 CFHR4Q92496 578 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 SLC7A6OSQ96CW6 309 aaPredicted RBP7.03□□□□□ -1.28
PTCD3-208ENST00000469585 HSPBAP1Q96EW2 488 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 CDHR1Q96JP9 859 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 PIGSQ96S52 555 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 RMDN3Q96TC7 470 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 C22orf23Q9BZE7 217 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 RIOX1Q9H6W3 641 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 PSTPIP2Q9H939 334 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 JMJD4Q9H9V9 463 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 XPNPEP3Q9NQH7 507 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 DMRT3Q9NQL9 472 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 ANKRD6Q9Y2G4 727 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 DUSP10Q9Y6W6 482 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 A0A0G2JMZ2 1700 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 ZNF236Q9UL36 1845 aa7.03□□□□□ -1.28
PTCD3-208ENST00000469585 COL11A1P12107 1806 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-208ENST00000469585 MATN2O00339 956 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 TSPAN6O43657 245 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 SCGB1D2O95969 90 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 FOSP01100 380 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-208ENST00000469585 PF4V1P10720 104 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 BMP7P18075 431 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 RXRAP19793 462 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 CTGFP29279 349 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 KIR2DL3P43628 341 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 MCM2P49736 904 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 CPT1AP50416 773 aa7.02□□□□□ -1.29
PTCD3-208ENST00000469585 ALDH5A1P51649 535 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-208ENST00000469585 RPS6P62753 249 aaKnown RBP7.02□□□□□ -1.29
PTCD3-208ENST00000469585 TNFAIP2Q03169 654 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms