RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 A8MXQ7 604 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 CBX6O95503 412 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 ASMTLO95671 621 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 F7P08709 466 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-221ENST00000469415 CDH5P33151 784 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-221ENST00000469415 COPS2P61201 443 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 ATP11CQ8NB49 1132 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 PGLYRP2Q96PD5 576 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 SLC13A1Q9BZW2 595 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 NOD2Q9HC29 1040 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 SHOC2Q9UQ13 582 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 MYO18AQ92614 2054 aaKnown RBP18.61■□□□□ 0.57
MCF2L-221ENST00000469415 E2F8A0AVK6 867 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 CXCL11O14625 94 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 UGT1A9O60656 530 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 CRADDP78560 199 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 RBP5P82980 135 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 ZNF268Q14587 947 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-221ENST00000469415 MTHFD1LQ6UB35 978 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 NAT8LQ8N9F0 302 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 TTC25Q96NG3 672 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 MYLK2Q9H1R3 596 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 LHX5Q9H2C1 402 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 UGT1A7Q9HAW7 530 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 UGT1A10Q9HAW8 530 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 UGT1A8Q9HAW9 530 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 UBN1Q9NPG3 1134 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.61■□□□□ 0.57
MCF2L-221ENST00000469415 SLC12A4Q9UP95 1085 aa18.61■□□□□ 0.57
MCF2L-221ENST00000469415 VDRP11473 427 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 P4HA1P13674 534 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 IGFBP6P24592 240 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-221ENST00000469415 LMO2P25791 158 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 GRIA1P42261 906 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 ZNF200P98182 395 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-221ENST00000469415 FAAP100Q0VG06 881 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 GRIK4Q16099 956 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 CCDC14Q49A88 953 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 TAPT1Q6NXT6 567 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 FAM111AQ96PZ2 611 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 EURLQ9NYK6 297 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 FARP1Q9Y4F1 1045 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-221ENST00000469415 NME7Q9Y5B8 376 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 CCDC195A0A1B0GUA6 201 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 APOC4-APOC2K7ER74 178 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 PDHXO00330 501 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 GAS2O43903 313 aaKnown RBP18.6■□□□□ 0.57
MCF2L-221ENST00000469415 ZBED1O96006 694 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 APOC2P02655 101 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 SDC4P31431 198 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 GRM1Q13255 1194 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 XRCC4Q13426 336 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 PPP1R2P3Q6NXS1 205 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 LRRC6Q86X45 466 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 PYROXD2Q8N2H3 581 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 GPRC5AQ8NFJ5 357 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 ACAT1P24752 427 aaKnown RBP18.6■□□□□ 0.57
MCF2L-221ENST00000469415 ZNF143P52747 638 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-221ENST00000469415 GBE1Q04446 702 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 MOGSQ13724 837 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 MTFR1Q15390 333 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 NIPA2Q8N8Q9 360 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 ANKLE1Q8NAG6 615 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 CNPY3Q9BT09 278 aa18.6■□□□□ 0.57
MCF2L-221ENST00000469415 TOP3BO95985 862 aaKnown RBP18.59■□□□□ 0.57
MCF2L-221ENST00000469415 MT-ND3P03897 115 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 MCF2P10911 925 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 LAMC2Q13753 1193 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 ACCSLQ4AC99 568 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 POLNQ7Z5Q5 900 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 CXorf38Q8TB03 319 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 KCNV2Q8TDN2 545 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 PTPRN2Q92932 1015 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 MCRS1Q96EZ8 462 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 SNRNP25Q9BV90 132 aaKnown RBP18.59■□□□□ 0.57
MCF2L-221ENST00000469415 RNF39Q9H2S5 420 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-221ENST00000469415 TCRBV9S1A1TA0A576 114 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 ASB14A6NK59 587 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 C2CD4BA6NLJ0 364 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 CHUKO15111 745 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 ATP6V1G2O95670 118 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 PFKMP08237 780 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 PYGBP11216 843 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 PHBP35232 272 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 PTK7Q13308 1070 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 CASC4Q6P4E1 433 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 DRICH1Q6PGQ1 229 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-221ENST00000469415 CTU1Q7Z7A3 348 aaKnown RBP18.59■□□□□ 0.57
MCF2L-221ENST00000469415 FAM131BQ86XD5 332 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 SUGP1Q8IWZ8 645 aaKnown RBP18.59■□□□□ 0.57
MCF2L-221ENST00000469415 TTC13Q8NBP0 860 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 CMASQ8NFW8 434 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-221ENST00000469415 C16orf70Q9BSU1 422 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 IL1RAPL1Q9NZN1 696 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 SEPT10Q9P0V9 454 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 SLC17A6Q9P2U8 582 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 HESX1Q9UBX0 185 aa18.59■□□□□ 0.57
MCF2L-221ENST00000469415 ADCY6O43306 1168 aa18.58■□□□□ 0.57
MCF2L-221ENST00000469415 TCEA3O75764 348 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms