RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 SMOQ99835 787 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 ZSWIM1Q9BR11 485 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 SELENOOQ9BVL4 669 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 TSGA10Q9BZW7 698 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 SFXN1Q9H9B4 322 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 PIDD1Q9HB75 910 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 CYLDQ9NQC7 956 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 WDR35Q9P2L0 1181 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 UXTQ9UBK9 157 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-216ENST00000468949 NAGPAQ9UK23 515 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 HCFC2Q9Y5Z7 792 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 EPN1Q9Y6I3 576 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-216ENST00000468949 SCINQ9Y6U3 715 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 UNC80Q8N2C7 3258 aa8.55□□□□□ -1.04
HDAC6-216ENST00000468949 SLC38A8A6NNN8 435 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 GOLGA8SH3BPF8 625 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 PIK3R2O00459 728 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 CAPN9O14815 690 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 ZSCAN12O43309 604 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 SEC24AO95486 1093 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 FTLP02792 175 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-216ENST00000468949 CFHP08603 1231 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 HNRNPA1P09651 372 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDAC6-216ENST00000468949 UNGP13051 313 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-216ENST00000468949 EPCAMP16422 314 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 YWHAQP27348 245 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 HOXA9P31269 272 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 GPD2P43304 727 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 MAGEA1P43355 309 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 GPR15P49685 360 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 CCZ1BP86790 482 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 CCZ1P86791 482 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-216ENST00000468949 KIF5AQ12840 1032 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 CAMK1Q14012 370 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 MTF1Q14872 753 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 LEXMQ3ZCV2 418 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 PTPN20Q4JDL3 420 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 PKDCCQ504Y2 493 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 ARHGAP29Q52LW3 1261 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 CYP4A22Q5TCH4 519 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 SDHAF4Q5VUM1 108 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 PMF1Q6P1K2 205 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 DCUN1D2Q6PH85 259 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 RAD9BQ6WBX8 426 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 PAQR9Q6ZVX9 377 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 PHF13Q86YI8 300 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-216ENST00000468949 TMEM139Q8IV31 216 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 ARHGAP18Q8N392 663 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 ACRBPQ8NEB7 543 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 PDZD8Q8NEN9 1154 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 SLC35F5Q8WV83 523 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 KCTD13Q8WZ19 329 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 SPATA17Q96L03 361 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 ZNF830Q96NB3 372 aaPredicted RBP8.54□□□□□ -1.04
HDAC6-216ENST00000468949 CPXM1Q96SM3 734 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 KCNK16Q96T55 309 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 PCDHB18PQ96TA0 734 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 DESI2Q9BSY9 194 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 SYT11Q9BT88 431 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 UBXN6Q9BZV1 441 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 NACA2Q9H009 215 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 CSNK1G1Q9HCP0 422 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 MRPL47Q9HD33 250 aaKnown RBP8.54□□□□□ -1.04
HDAC6-216ENST00000468949 CNGB3Q9NQW8 809 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 ASAH2Q9NR71 780 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 ZDHHC7Q9NXF8 308 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 CLDND1Q9NY35 253 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 CTTNBP2NLQ9P2B4 639 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 MYO1AQ9UBC5 1043 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 CNOT8Q9UFF9 292 aaKnown RBP8.54□□□□□ -1.04
HDAC6-216ENST00000468949 FAM50BQ9Y247 325 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 ASB3Q9Y575 518 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 REV3LO60673 3130 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 CUL9Q8IWT3 2517 aa8.54□□□□□ -1.04
HDAC6-216ENST00000468949 TULP2O00295 520 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 CCL16O15467 120 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 KRT86O43790 486 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 TBX10O75333 385 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 ZMYND10O75800 440 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 BEST1O76090 585 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 FGF19O95750 216 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 ZBED1O96006 694 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 ABL1P00519 1130 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 ERBB2P04626 1255 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 RALAP11233 206 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 ATF6P18850 670 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 MMP8P22894 467 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 DEKP35659 375 aaKnown RBP8.53□□□□□ -1.04
HDAC6-216ENST00000468949 NOP2P46087 812 aaKnown RBP8.53□□□□□ -1.04
HDAC6-216ENST00000468949 VAV2P52735 878 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 CACNA2D1P54289 1103 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 GPC5P78333 572 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 HYAL1Q12794 435 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 IFI16Q16666 785 aaKnown RBP8.53□□□□□ -1.04
HDAC6-216ENST00000468949 PUS10Q3MIT2 529 aaKnown RBP8.53□□□□□ -1.04
HDAC6-216ENST00000468949 HS1BP3Q53T59 392 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 FAM183BPQ6ZVS7 135 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 PDZD4Q76G19 769 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-216ENST00000468949 MON1BQ7L1V2 547 aa8.53□□□□□ -1.04
HDAC6-216ENST00000468949 RSRC2Q7L4I2 434 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms