RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 BEST1O76090 585 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 OLFM2O95897 454 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 OAS1P00973 400 aaKnown RBP7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 EGFP01133 1207 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 CNR2P34972 360 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 ID4P47928 161 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 MXI1P50539 228 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 MCCD1P59942 119 aaPredicted RBP7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 INCA1Q0VD86 236 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 STIM1Q13586 685 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 SIM2Q14190 667 aaPredicted RBP7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 ZNF394Q53GI3 561 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 COBLL1Q53SF7 1204 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 DCAF17Q5H9S7 520 aaPredicted RBP7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 SNX30Q5VWJ9 437 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 ANKRD40Q6AI12 368 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 ISM2Q6H9L7 571 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 PRR23BQ6ZRT6 265 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 FILIP1Q7Z7B0 1213 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 TTC39CQ8N584 583 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 GPR161Q8N6U8 529 aaKnown RBP7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 KIAA1958Q8N8K9 716 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 FBXL13Q8NEE6 735 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 ZMIZ2Q8NF64 920 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 CCDC26Q8TAB7 109 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 SPATA20Q8TB22 786 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 HEXIM2Q96MH2 286 aaKnown RBP7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 TWNKQ96RR1 684 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 HNRNPABQ99729 332 aaKnown RBP7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 CSNK1G1Q9HCP0 422 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 TLR8Q9NR97 1041 aaKnown RBP7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 C2orf42Q9NWW7 574 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 RAB20Q9NX57 234 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 IL37Q9NZH6 218 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 CFAP97Q9P2B7 532 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 TBC1D14Q9P2M4 693 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 GMEB2Q9UKD1 530 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 FANCMQ8IYD8 2048 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 GREB1Q4ZG55 1949 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 ANAPC1Q9H1A4 1944 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 GPR179Q6PRD1 2367 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 OBSL1O75147 1896 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 OTOGLQ3ZCN5 2332 aa7.6□□□□□ -1.19
SNRPD3-205ENST00000468770 CFAP54Q96N23 3096 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 PTPRDP23468 1912 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 E2F8A0AVK6 867 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 FAM92AA1XBS5 289 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 PSMA7O14818 248 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 SCAMP3O14828 347 aaKnown RBP7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 SLC16A3O15427 465 aaKnown RBP7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 COCHO43405 550 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 HRO43593 1189 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 ZDHHC11BP0C7U3 371 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 ACO1P21399 889 aaKnown RBP7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 HOXA6P31267 233 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 TUBP50607 506 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 PMS1P54277 932 aaKnown RBP7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 LRRC63Q05C16 580 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 DMWDQ09019 674 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 DHCR24Q15392 516 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 LPAL2Q16609 132 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 NAIF1Q69YI7 327 aaPredicted RBP7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 PKN3Q6P5Z2 889 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 CLEC20AQ6ZU45 233 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 CEP68Q76N32 757 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 ELOA2Q8IYF1 753 aaPredicted RBP7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 CAMKK1Q8N5S9 505 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 WHAMMQ8TF30 809 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 SEMA4DQ92854 862 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 JAKMIP2Q96AA8 810 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 DHTKD1Q96HY7 919 aaPredicted RBP7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 FAXDC2Q96IV6 333 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 CCSER2Q9H7U1 834 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 CISHQ9NSE2 258 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 GMIPQ9P107 970 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 ARMCX3Q9UH62 379 aaPredicted RBP7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 SH3BP1Q9Y3L3 701 aa7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 KIF26AQ9ULI4 1882 aaPredicted RBP7.59□□□□□ -1.19
SNRPD3-205ENST00000468770 SPTBN4Q9H254 2564 aa7.59□□□□□ -1.2
SNRPD3-205ENST00000468770 ATG2BQ96BY7 2078 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 CCDC163A0A0D9SF12 145 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 TRIM49BA6NDI0 452 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 TLR5O60602 858 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 TBX18O95935 607 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 ADH1CP00326 375 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 CYP17A1P05093 508 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 ATP5C1P36542 298 aaKnown RBP7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 PPP1R2P41236 205 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 PXNP49023 591 aaPredicted RBP7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 SLC8A3P57103 927 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 GOLGA8FQ08AF8 430 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 GOLGA8DPQ0D2H9 430 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 SRSF5Q13243 272 aaKnown RBP7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 CBWD6Q4V339 395 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 CBWD3Q5JTY5 395 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 CBWD5Q5RIA9 395 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 PPP1R26Q5T8A7 1209 aaPredicted RBP7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 BTBD8Q5XKL5 378 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 LAIR1Q6GTX8 287 aa7.58□□□□□ -1.2
SNRPD3-205ENST00000468770 KLHL10Q6JEL2 608 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms