RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 USP17L7P0C7H9 530 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 ZNF18P17022 549 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 RPS9P46781 194 aaKnown RBP15.33■□□□□ 0.04
COL27A1-203ENST00000468565 FUKQ8N0W3 1084 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 NUP93Q8N1F7 819 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 ZNF687Q8N1G0 1237 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 FAM3CQ92520 227 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 MED10Q9BTT4 135 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 DNAI2Q9GZS0 605 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 FAM124BQ9H5Z6 455 aaPredicted RBP15.33■□□□□ 0.04
COL27A1-203ENST00000468565 METTL14Q9HCE5 456 aaKnown RBP15.33■□□□□ 0.04
COL27A1-203ENST00000468565 TRPC7Q9HCX4 862 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 DMAP1Q9NPF5 467 aaPredicted RBP15.33■□□□□ 0.04
COL27A1-203ENST00000468565 RAB20Q9NX57 234 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 TRPM5Q9NZQ8 1165 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 ARMCX3Q9UH62 379 aaPredicted RBP15.33■□□□□ 0.04
COL27A1-203ENST00000468565 CCL26Q9Y258 94 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 COQ4Q9Y3A0 265 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 RTN3O95197 1032 aaPredicted RBP15.32■□□□□ 0.04
COL27A1-203ENST00000468565 DCAF17Q5H9S7 520 aaPredicted RBP15.32■□□□□ 0.04
COL27A1-203ENST00000468565 TCERG1LQ5VWI1 586 aa15.32■□□□□ 0.04
COL27A1-203ENST00000468565 TTC39CQ8N584 583 aa15.32■□□□□ 0.04
COL27A1-203ENST00000468565 SEMA4DQ92854 862 aa15.32■□□□□ 0.04
COL27A1-203ENST00000468565 NT5C1AQ9BXI3 368 aa15.32■□□□□ 0.04
COL27A1-203ENST00000468565 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.32■□□□□ 0.04
COL27A1-203ENST00000468565 COMMD8Q9NX08 183 aa15.32■□□□□ 0.04
COL27A1-203ENST00000468565 ZNF840PA6NDX5 716 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 CILPO75339 1184 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 CKMP06732 381 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 TCF3P15923 654 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 FZD5Q13467 585 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 TTI2Q6NXR4 508 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 NYAP1Q6ZVC0 841 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 FRMD5Q7Z6J6 570 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 C1orf210Q8IVY1 113 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 PDZD8Q8NEN9 1154 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 NELFBQ8WX92 580 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 OVCA2Q8WZ82 227 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 SLC35C1Q96A29 364 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 ZFYVE19Q96K21 471 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 SLITRK1Q96PX8 696 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 TWNKQ96RR1 684 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 FAM83CQ9BQN1 747 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 CSNK1G1Q9HCP0 422 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 KRT82Q9NSB4 513 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 C2orf78A6NCI8 922 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 USP27XA6NNY8 438 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 AP1G2O75843 785 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 CHRM1P11229 460 aaPredicted RBP15.31■□□□□ 0.04
COL27A1-203ENST00000468565 CCDC130P13994 396 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 NBL1P41271 181 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 KPNA1P52294 538 aaPredicted RBP15.31■□□□□ 0.04
COL27A1-203ENST00000468565 USP4Q13107 963 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 ORC1Q13415 861 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 ZNF77Q15935 545 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 CBWD6Q4V339 395 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 WDR44Q5JSH3 913 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 CBWD3Q5JTY5 395 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 CBWD5Q5RIA9 395 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 KLHL10Q6JEL2 608 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 RALGPS2Q86X27 583 aaPredicted RBP15.31■□□□□ 0.04
COL27A1-203ENST00000468565 SLC2A14Q8TDB8 520 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 WHAMMQ8TF30 809 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 SLC22A12Q96S37 553 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 KCNK16Q96T55 309 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 PHOX2BQ99453 314 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 HNRNPABQ99729 332 aaKnown RBP15.31■□□□□ 0.04
COL27A1-203ENST00000468565 DUSP9Q99956 384 aaKnown RBP15.31■□□□□ 0.04
COL27A1-203ENST00000468565 IER2Q9BTL4 223 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 FAM86C1Q9NVL1 165 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 GTSE1Q9NYZ3 720 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 IL37Q9NZH6 218 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 ARHGAP26Q9UNA1 814 aa15.31■□□□□ 0.04
COL27A1-203ENST00000468565 TNFRSF10BO14763 440 aa15.3■□□□□ 0.04
COL27A1-203ENST00000468565 HDCP19113 662 aa15.3■□□□□ 0.04
COL27A1-203ENST00000468565 YWHAQP27348 245 aa15.3■□□□□ 0.04
COL27A1-203ENST00000468565 CTHP32929 405 aa15.3■□□□□ 0.04
COL27A1-203ENST00000468565 TAF10Q12962 218 aa15.3■□□□□ 0.04
COL27A1-203ENST00000468565 ITPRIPL2Q3MIP1 535 aa15.3■□□□□ 0.04
COL27A1-203ENST00000468565 CC2D1AQ6P1N0 951 aaPredicted RBP15.3■□□□□ 0.04
COL27A1-203ENST00000468565 ARL14EPQ8N8R7 260 aaPredicted RBP15.3■□□□□ 0.04
COL27A1-203ENST00000468565 C12orf29Q8N999 325 aa15.3■□□□□ 0.04
COL27A1-203ENST00000468565 ZMIZ2Q8NF64 920 aa15.3■□□□□ 0.04
COL27A1-203ENST00000468565 RIN3Q8TB24 985 aa15.3■□□□□ 0.04
COL27A1-203ENST00000468565 CYP2S1Q96SQ9 504 aa15.3■□□□□ 0.04
COL27A1-203ENST00000468565 GKN1Q9NS71 199 aa15.3■□□□□ 0.04
COL27A1-203ENST00000468565 FAM49BQ9NUQ9 324 aa15.3■□□□□ 0.04
COL27A1-203ENST00000468565 TRMT1Q9NXH9 659 aaKnown RBP15.3■□□□□ 0.04
COL27A1-203ENST00000468565 CTNND2Q9UQB3 1225 aa15.3■□□□□ 0.04
COL27A1-203ENST00000468565 FAM92AA1XBS5 289 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 PROB1E7EW31 1015 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 SPECC1L-ADORA2AF8WAN1 911 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 OLFM2O95897 454 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 TUBB4AP04350 444 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 CD58P19256 250 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 SLC5A3P53794 718 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 TNK2Q07912 1038 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 PAK1Q13153 545 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 MTF1Q14872 753 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 PDGFRLQ15198 375 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms